Gene Bcenmc03_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0507 
Symbol 
ID6122188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp551006 
End bp551770 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID641637064 
Productphosphoglycolate phosphatase 
Protein accessionYP_001763807 
Protein GI170731860 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.263743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.890695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCACT CGTCGTTCGC CGGCCGCGCG CCGGCCGGGG CTGCTGCGGA CGCGGCCCCG 
ATCCGCTTCG CCGCGCCGCG CATCGATGCG GCGCTGATCG ACCTCGACGG CACGATGGTC
GACACCGCCG ACGATTTCAC GGCCGGCCTG AACGGGATGC TCGCGCAGCT CGGCGCGCCG
GCCACGTCGC GCGACGAAGT GATCGGCTAC GTCGGCAAGG GCTCCGAACA CCTGATCCAG
AGCGTGCTGA AGCCGCGCTT CCCGGCCGAC GAAGCGCACG CGCGCTTCGA CGACGCACTG
GCGATCTACC AGAGCGAATA CGCGAAGATC AACGGCCGCC ACACGCGTCT CTATCCGGAC
GTGGCGGCCG GGCTCGACGC GCTGCGCGCG GCCGGCATCC GGCTCGCGTG CGTGACCAAC
AAGCCGCACC GCTTCGCGGT CGAACTGCTC GAACAATACG GGCTCGCCGG CTGCTTCGGC
ATCGTGCTGG GCGGCGACAG CGTCGCGCGC AAGAAGCCCG ATCCGCTGCC GATGCTGACG
GCCTGCGACG CGCTCGGCGT CGCGCCGGAC GCCGCGGTCG CGATCGGCGA CTCGGAAAAC
GACGCGCTGG CAGGCCGCGC GGCCGGGATG GCGACGCTGA CGGTGCCGTA CGGCTACAAC
CACGGCAAAG CTATACAAAC GATAAATTCG GATGGTATAG TCGATTCGTT GCTGGTCGCG
GCTCGCGCAA TTTCCGCGCA CAACGCCGCC CGGCCAACCG TCTGA
 
Protein sequence
MAHSSFAGRA PAGAAADAAP IRFAAPRIDA ALIDLDGTMV DTADDFTAGL NGMLAQLGAP 
ATSRDEVIGY VGKGSEHLIQ SVLKPRFPAD EAHARFDDAL AIYQSEYAKI NGRHTRLYPD
VAAGLDALRA AGIRLACVTN KPHRFAVELL EQYGLAGCFG IVLGGDSVAR KKPDPLPMLT
ACDALGVAPD AAVAIGDSEN DALAGRAAGM ATLTVPYGYN HGKAIQTINS DGIVDSLLVA
ARAISAHNAA RPTV