| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0494 |
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| Symbol | |
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| ID | 6122175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 536033 |
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| End bp | 537424 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641637051 |
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| Product | GABA permease |
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| Protein accession | YP_001763794 |
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| Protein GI | 170731847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAA GCAACACAGG CCTCGGCACT GGCCTGAAGC AGCGTCACGT GACGATGATG
TCGATTGCCG GTGTGATCGG CGCGGGCTTG TTCGTCGGCT CCGGCCACGC GATCGCGGAA
GCCGGGCCGG CATCGATACT CGCGTATGCG ATCGCGGGCG TGCTGGTCGT GCTGGTGATG
CGCATGCTCG GCGAAATGGC CGTCGCGCAT CCGGACAGCG GGTCGTTCTC GACCTATGCC
GATCGAGCGA TCGGCCACTG GGCCGGCTTC ACGATCGGCT GGTTGTACTG GTGGTTCTGG
GTGCTGGTGA TTCCGATCGA GGCGACCGCC GCCGCGACCA TCCTCAATGC GTGGTTCCCG
GGCATCGCGA CGTGGATCTT CGCGCTCGGC ATCACGCTGC TGCTCACCGT CACCAACCTC
TTCTCCGTCA AGAACTACGG CGAATTCGAA TTCTGGTTCG CGCTGATCAA GGTCGTCGCG
ATCGTCGTGT TCCTGTGCAT CGGCGGTGCG GCGATCGTCG GCATCATTCC GGCGCCGGCC
GTGTCGGGCG TGTCGAACCT GTTCGTGCAC GACGGCTTCA TGCCGCACGG CGCGAGCGCG
GTGCTCGCGG CGATGCTGAC GACGATGTTC TCGTTCCTCG GCACGGAGAT CGTGACGATC
GCGGCCGCCG AATCGGACAA CCCGCAGCGC CAGATCGTAC GTGCGACGAA CTCGGTCATC
TGGCGTATCA CGCTGTTCTA TCTCGGCTCG ATCCTCGTCG TCGCGGCCAT CGTGCCGTGG
AACGACCCGC TGCTGCCGAA GCACGGCTCG TATCAGCGCG CGATGGAGCT GATCGGCGTC
CCCAACGCGA AGGCGATCAT CGACGTGATC GTGCTCGTGT CGGTCGCGAG CTGCCTGAAT
TCGGCGCTGT ACACCGCGTC GCGGATGCTG TTCTCGCTGT CCCGGCGCAA GGACGCGCCC
GCCTTCCTGC ATCGCACCGA TTCGACCGGC ACGCCGCGCG CGGCGGTGCT CGCATCGACC
GCGTTCGGTT TCCTGACCGT GATCGCGAAC TACCTGATGC CGGAGCAGGT GTTCGGCTTC
CTGCTCGCGA CGTCGGGCGC GATCGCGTTG CTCGTGTATC TCGTGATCGC GATCTCGCAG
CTGCGGATGC GCAAGACGCT CGAAGCGGGC GGCGCGGACC TGACGTTGCG GATGTGGCTG
TTCCCGTGGC TCACGTGGGC GGTGATCCTG TTCATCTGCG GCACGCTGAC CGTGATGTTC
GTCAGCGAGG AGCACCGGAT GGAAGTCGGC GCGACGGCCG TGCTGGCGTT GATCGTGCTG
CTCGCGTCGT GGCTGAACAA GCGCGGCCGC GATGCGCGGG CGAACGCGGG GCGCCGGGTG
TCGGCGACGT GA
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| Protein sequence | MSGSNTGLGT GLKQRHVTMM SIAGVIGAGL FVGSGHAIAE AGPASILAYA IAGVLVVLVM
RMLGEMAVAH PDSGSFSTYA DRAIGHWAGF TIGWLYWWFW VLVIPIEATA AATILNAWFP
GIATWIFALG ITLLLTVTNL FSVKNYGEFE FWFALIKVVA IVVFLCIGGA AIVGIIPAPA
VSGVSNLFVH DGFMPHGASA VLAAMLTTMF SFLGTEIVTI AAAESDNPQR QIVRATNSVI
WRITLFYLGS ILVVAAIVPW NDPLLPKHGS YQRAMELIGV PNAKAIIDVI VLVSVASCLN
SALYTASRML FSLSRRKDAP AFLHRTDSTG TPRAAVLAST AFGFLTVIAN YLMPEQVFGF
LLATSGAIAL LVYLVIAISQ LRMRKTLEAG GADLTLRMWL FPWLTWAVIL FICGTLTVMF
VSEEHRMEVG ATAVLALIVL LASWLNKRGR DARANAGRRV SAT
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