Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0479 |
Symbol | |
ID | 6122160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 521842 |
End bp | 522438 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637036 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_001763779 |
Protein GI | 170731832 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.526257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.540172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCTT CCAGCGCGCC GCCGCGCCGG CTGATCGTCG CGATCACCGG CGCCACCGGT GTGATCTACG GTGTGCGGCT GCTCGATCTG CTGCGCGCCG CCGGCGGCGT CGAAACGCAT CTGCTGATTT CGAACGCCGG CTGGCTCAAC ATCCAGCATG AACTGAAGCT GCCGAAGGCC GATATCGAAA GCCGTGCGGA CGTCGTGCAT TCGGTGCGCG ACGTCGGCGC GACGATCGCG TCGGGCTCGT TCGCGACCGA CGGCATGGTG ATCGCGCCCT GCTCGATGAA GACGCTCGCG AGCGTCGCGC ACGGGCTGTC CGACAACCTG GTCACCCGTG CGGCCGACGT CACGCTGAAG GAACGCCGCC GTCTCGTGCT GATGGTGCGC GAAACGCCGT TCAACCTCGC GCATCTGCGC AACATGACCG CCGTCACCGA AATGGGCGGC ATCGTCTTTC CGCCGCTGCC CGCGTTCTAC GCGATGCCGA AGACGATCGA GGAACTCGTC GACCAGACCG TCACACGCGT CCTCGACCTG TTCGCCCTCA GCGCGCCGCT CACGACGCCG TGGCCCGGCA TCCGGCACGC GCAGTAA
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Protein sequence | MASSSAPPRR LIVAITGATG VIYGVRLLDL LRAAGGVETH LLISNAGWLN IQHELKLPKA DIESRADVVH SVRDVGATIA SGSFATDGMV IAPCSMKTLA SVAHGLSDNL VTRAADVTLK ERRRLVLMVR ETPFNLAHLR NMTAVTEMGG IVFPPLPAFY AMPKTIEELV DQTVTRVLDL FALSAPLTTP WPGIRHAQ
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