Gene Bcenmc03_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0479 
Symbol 
ID6122160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp521842 
End bp522438 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID641637036 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_001763779 
Protein GI170731832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.526257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.540172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTT CCAGCGCGCC GCCGCGCCGG CTGATCGTCG CGATCACCGG CGCCACCGGT 
GTGATCTACG GTGTGCGGCT GCTCGATCTG CTGCGCGCCG CCGGCGGCGT CGAAACGCAT
CTGCTGATTT CGAACGCCGG CTGGCTCAAC ATCCAGCATG AACTGAAGCT GCCGAAGGCC
GATATCGAAA GCCGTGCGGA CGTCGTGCAT TCGGTGCGCG ACGTCGGCGC GACGATCGCG
TCGGGCTCGT TCGCGACCGA CGGCATGGTG ATCGCGCCCT GCTCGATGAA GACGCTCGCG
AGCGTCGCGC ACGGGCTGTC CGACAACCTG GTCACCCGTG CGGCCGACGT CACGCTGAAG
GAACGCCGCC GTCTCGTGCT GATGGTGCGC GAAACGCCGT TCAACCTCGC GCATCTGCGC
AACATGACCG CCGTCACCGA AATGGGCGGC ATCGTCTTTC CGCCGCTGCC CGCGTTCTAC
GCGATGCCGA AGACGATCGA GGAACTCGTC GACCAGACCG TCACACGCGT CCTCGACCTG
TTCGCCCTCA GCGCGCCGCT CACGACGCCG TGGCCCGGCA TCCGGCACGC GCAGTAA
 
Protein sequence
MASSSAPPRR LIVAITGATG VIYGVRLLDL LRAAGGVETH LLISNAGWLN IQHELKLPKA 
DIESRADVVH SVRDVGATIA SGSFATDGMV IAPCSMKTLA SVAHGLSDNL VTRAADVTLK
ERRRLVLMVR ETPFNLAHLR NMTAVTEMGG IVFPPLPAFY AMPKTIEELV DQTVTRVLDL
FALSAPLTTP WPGIRHAQ