| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0449 |
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| Symbol | |
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| ID | 6122130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 486182 |
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| End bp | 488017 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641637006 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001763749 |
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| Protein GI | 170731802 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.869573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAT TGCTGCCGTA TTACGAACGC GAATTATCGT TTTTGCGGCG CTATTCGCGA
GATTTCGCCG AACGCTATCC GAAGATCGCC GCGCGGCTCG CGCTGTCCGG CGAGCATTGC
GAGGATCCGC ACGTCGAGCG GATGATCGAG TCATTCGCGC TGCTCGGCGC GCGCATCAAC
AAGAAGCTCG ACGACGATTA CCCGGAATTC ACCGAAGCGC TGCTGGAAGT GCTGTATCCG
CACTACCTGC GGCCGTTCCC GTCGTGCTCG ATCGCGCAGT TCACGCCGGC GTCGCCCGGC
CAGCAGACCG AACCGGTCGT GATCGATCGC GGCACCGAGC TGAAAAGCCG TCCGATCCGC
GGCGTGCAAT GCCGGTTCCG TACCGCCTAC GACGTGACGC TTGCGCCGAT CCGCATCTCG
GAAGCGCGCT ATACGCCGGT CGCGCTCGCG CCGAGCGCGA CGGTGCTGCC GTCGAACGCG
ACGGGCGTGA TCTCGATCAC GTTCGAATCG CTCGCCGCGC AGCTCGATCT CGGCGCGCTG
AAGCTGTCGA CGCTGCGCGC GCACCTGCAC GGCGAGCAGT CGTTCGTCGC CGCGCTGACC
GATTGCCTGT TCGTCAACGT GCTCGGTGCG TACGTCGAGC CCGAACGCAA CGGCCGCTGG
ACCGCGCTGC GCAAGCTGCC GATCGCGCAG GCCGGCTTCG CCGAGGACGA CGCGCTGATC
GACTATCCGG CGAAATCGCA CCCCGCGTAC CGGCTGCTCA CCGAATACTT CGCGTTCCCC
GACAAGTTCG ATTTCGTCGA CTTCGACCTC GCGGCGATCG CACGCGCATC GGGCCGCTGC
CAGCGCGCGA CGCTGCATCT GGTGCTGCAG GACGTGCGCA GCGATTCGCA TATCGCGCGC
TTGCTCGAAC TGCTGACGGC GAGCCATTTC CGGCTGTTCT GCACGCCGAT CGTCAACCTG
TTTCGCCAGC ACGGCGAGCC GATCCGCATC ACGCACCGCG CGGTGTCGTA TCCGGTGATC
GCCGAGGCGC GGCGTGCGTT CGCGTACGAG GTGTACTCGA TCGACTCGGT GAAGCTCGTC
CGGCAGCAGG CGCACGAGGA ATCGGTGATC GAGTTCCGGC CGTTCTATTC ACTGCATCAC
GGCGAATCGG CGCGCATCGG CCATTACTGG TTCGCGCGCC GCAACGACTG GGTCGCGCAG
AAGAGCCCCG GCTATGAAAC CGAGATCTCG ATCGTCGACA TCGACTTCGA GCCGACGTCG
CCGCAGACCG ACACGCTGAG CCTCGACCTC ACCTGCACGA ACCGCGACCT GCCTTCGATG
CTGGCGTTCG GCCTCGAAGG CGGCGACCTG TTCCAGGAAG GCGGGGCGCA GACGAGCGGC
ATCTCGCTGC TGCGCCGCCC GACGCAGAGC GTGCGCTTCG AGCGCGGCCG CGCCGCGCAC
TGGCGGCTCG TGTCGCACCT CGCGCTCAAC CACGTGTCGC TCGTCGCGCA CGGCCTCGCG
CCGCTGAAGG AAATGCTGAC GCTGTACGAC CTGCGGCGCA CGGCCGTGTC GATGCGCCAG
ATCGACGGTC TGGCCGGCGT CGAGCAGCGC GGGGCGGTGC AGTGGCTGCC CGGCAAGCCG
TTCGCGACCT TCGTGCGCGG CATCGAGATC CGGCTGACGA TCGACGAGGA GCACTTCGTC
GGCGCGAGCC TTGCGTCGTT CGTGCGCGTG CTCGACAGCT TCTTCGGGCT GTACGTCCAC
CTCAACAGTT TCGTTCAATT GGTCGTCGTG TCGAAGCGCA CCGGCGAGGA GATCATCCGA
TGCAAGCCCC GAACCGGCGA ATCGATCCTG GCGTAG
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| Protein sequence | MEELLPYYER ELSFLRRYSR DFAERYPKIA ARLALSGEHC EDPHVERMIE SFALLGARIN
KKLDDDYPEF TEALLEVLYP HYLRPFPSCS IAQFTPASPG QQTEPVVIDR GTELKSRPIR
GVQCRFRTAY DVTLAPIRIS EARYTPVALA PSATVLPSNA TGVISITFES LAAQLDLGAL
KLSTLRAHLH GEQSFVAALT DCLFVNVLGA YVEPERNGRW TALRKLPIAQ AGFAEDDALI
DYPAKSHPAY RLLTEYFAFP DKFDFVDFDL AAIARASGRC QRATLHLVLQ DVRSDSHIAR
LLELLTASHF RLFCTPIVNL FRQHGEPIRI THRAVSYPVI AEARRAFAYE VYSIDSVKLV
RQQAHEESVI EFRPFYSLHH GESARIGHYW FARRNDWVAQ KSPGYETEIS IVDIDFEPTS
PQTDTLSLDL TCTNRDLPSM LAFGLEGGDL FQEGGAQTSG ISLLRRPTQS VRFERGRAAH
WRLVSHLALN HVSLVAHGLA PLKEMLTLYD LRRTAVSMRQ IDGLAGVEQR GAVQWLPGKP
FATFVRGIEI RLTIDEEHFV GASLASFVRV LDSFFGLYVH LNSFVQLVVV SKRTGEEIIR
CKPRTGESIL A
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