| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0442 |
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| Symbol | |
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| ID | 6122123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 479847 |
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| End bp | 481193 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641636999 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001763742 |
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| Protein GI | 170731795 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.236466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.429573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATT CGGCCAAGGT GCTGTGGGGG GAAGGGCTGT TCCTCCGGCC TCAACACTTT
CAACGGCAGG ACGCGTACCA CGAGGCGCGC CTGTTCGAGT CCATCCAGGC GATCCAGCCG
TACAACTGGG GCGTGCGCTC GGTGCGCATC GACCGCGACG CGCTCGGCAG CAACGTGCTG
CGGGTCGCCG AGCTCGCGCT CGTGTTCCCG GACGGCGCGC TGTATGCCGC GCCGCAGGCT
GACGATCTGC CGCCGCCGAT CGCGCTGGAT ACGTTGCCCG ACGGCATCAA CGAATTCGTG
TTCTATCTCG CGCTGCACCC GTTGCGCGAG AACGGCACCA ACTACAGCGA CGATCCGGCC
GCCGGCTTCA TGACGCGGTT CGTCAGCGAG CAGACGAGCG TCGCCGACAA CTTCACCGAC
GCCGCCGAAG CCGACATCAC GTTCCTGAAG ACGCAGGTCA AGCTGATCGC GCACAGCGAG
CCGCGCGACC AGCTGCTTTC GGTGCCGCTC GTGCGTGTGC GCCGCACCGC GACGTCCGGC
TTCGAGATCG ACGACAGCTT CGTGCCGCCG TGCCTCGCGA TCGAAGCGTC GCCGATCCTG
CACCAGCGGC TGCGCCAGCT GGTCGACGCA CTGCAGGCCA AGGTGAACGC GCTGTACGGC
TTTCACCGCG AACCGTCGAA GAACATCATC GAATTCCGCT CGGGCGACAT CGCGTCGTTC
TGGCTGCTGC ATACGGCGAA TGCCGCATTC GCGACGCTCG CGCACCTGCA CCAGCACGCG
GCACTGCATC CGGAGCGGCT GTTCCAGGAA CTGCTGCGCC TCGCGGGCCA GCTGATGACG
TTCTCGAAGG GCTATACGCT CGCCGACCTG CCCGTGTACC GCCACGACGA CCCGGGCCCG
AGCTTCGCGC GCCTCGACCT GATGCTGCGC GAACTGCTCG ACACCGTGAT TTCGACGCGC
TATTTCGCGA TCACGCTCGA CGAGGTGCGC CCGTCGTTCC ACCTCGGCCG CCTCGATTCC
GGCAAGATCG ACGACAAGAC CGAGTTCTAC CTCGCGGTGT CCGCGGACAT GCCGAGCGTC
GAGCTCGTCG ATGCGGTGCC GGCCCGCTTC AAGGTCGGCG CGCCCGACGA CGTCGACAAG
CTCGTGCTGT CGGCGATGCC CGGCGTGCGG CTGTCGTACA CGCCGCAGGT GCCGCCCGCG
ATTCCGGTGC GCCCCGGCGC GTGCTACTTC GCGCTCGATT CACGCAGCCC GCTGTACGAG
CGCATGCTGC AGGCCCAGTC CGCGATGATC TATGCGCCGA CTGGCATCAA TGACCTGAAA
TTCGAACTGA TCGCGGTCAC ATCATGA
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| Protein sequence | MSYSAKVLWG EGLFLRPQHF QRQDAYHEAR LFESIQAIQP YNWGVRSVRI DRDALGSNVL
RVAELALVFP DGALYAAPQA DDLPPPIALD TLPDGINEFV FYLALHPLRE NGTNYSDDPA
AGFMTRFVSE QTSVADNFTD AAEADITFLK TQVKLIAHSE PRDQLLSVPL VRVRRTATSG
FEIDDSFVPP CLAIEASPIL HQRLRQLVDA LQAKVNALYG FHREPSKNII EFRSGDIASF
WLLHTANAAF ATLAHLHQHA ALHPERLFQE LLRLAGQLMT FSKGYTLADL PVYRHDDPGP
SFARLDLMLR ELLDTVISTR YFAITLDEVR PSFHLGRLDS GKIDDKTEFY LAVSADMPSV
ELVDAVPARF KVGAPDDVDK LVLSAMPGVR LSYTPQVPPA IPVRPGACYF ALDSRSPLYE
RMLQAQSAMI YAPTGINDLK FELIAVTS
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