| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0404 |
|---|
| Symbol | hisD |
|---|
| ID | 6122087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 442894 |
|---|
| End bp | 444210 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641636962 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001763706 |
|---|
| Protein GI | 170731759 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.319794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCA CCATCCGCAA GCTCGATTCG ACGAACGAAG GCTTCGGTGC CGCGCTGCGC
GCCGTGCTCG CGTTCGAGGC GAGCGAAGAC GAGGCGATCG AGCAATCGGT CGCGAAGATC
CTCGCCGACG TGAAGTCGCG CGGCGACGCC GCGGTGCTCG AGTACACGAA CCGTTTCGAC
CGGCTGAGCG CGAACAGCGT CGCCGCGCTC GAACTGCCGC AGGACGCGCT GCAGACGGCG
CTCGACGGCC TCGCGCCGAA GGCGCGTGCG GCGCTGGAAG CGGCCGCGGC GCGGGTGCGC
GCGTACCACG AGAAGCAGAA GATCGAGTGC GGCACGCATA GCTGGCAGTA CACGGAAAGC
GACGGCACGG TGCTCGGCCA GAAGGTCACG CCGCTTGACC GCGTCGGCCT GTACGTGCCG
GGCGGCAAGG CCGCGTATCC GTCGTCGGTG CTGATGAACG CGATTCCCGC GCGCGTCGCG
GGCGTCGGCG AGATCGTGAT GGTCGTGCCG ACGCCGGACG GCGTGAAGAA CGACCTCGTG
CTGGCGGCGG CGCTGCTCGG CGGCGTCGAT CGCGTGTTCA CGATCGGCGG CGCGCAGGCG
GTCGGCGCGC TCGCGTACGG TACCGAGACG GTGCCGGCCG TCGACAAGAT CTGCGGCCCC
GGCAACGCGT ATGTCGCGTC GGCGAAGCGC CGCGTGTTCG GCACGGTCGG CATCGACATG
ATCGCCGGGC CGTCGGAAAT CCTGGTGCTG TGCGACGGGA CGACCGATCC GAACTGGGTC
GCGATGGACC TGTTCTCGCA GGCCGAGCAC GACGAACTCG CGCAGTCGAT CCTGCTGTGC
CCGGACGGTA CATTCCTCGA TCGCGTCGAG AAGGCGATCG GCGAACTGCT GCCGACGATG
CCGCGCCAGG ACGTGATCCG CGCGTCGCTC GAAGGCCGCG GCGCACTGAT CAAGGTGCGC
GACATGGCCG AGGCGTGCCG GATCGCGAAC GACATCGCGC CGGAACACCT CGAAATCTCG
GCGCTGGAGC CGCAGCAATG GGGTCAGCAG ATCCGCCACG CGGGCGCGAT CTTCCTCGGC
CGCTACACGA GCGAGAGCCT CGGCGACTAC TGCGCGGGCC CGAACCACGT GCTGCCGACG
TCGCGCACCG CGCGCTTCTC GTCACCGCTC GGCGTGTACG ACTTCATCAA GCGCTCGAGC
CTGATCGAGG TCAGCGCGGA AGGCGCGCAG ACGCTCGGCG AGATCGCATC CGAGCTCGCC
TACGGCGAAG GGCTGCAGGC GCACGCAAGG AGCGCCGAGT TCCGGATGAA GGGCTGA
|
|---|
| Protein sequence | MSITIRKLDS TNEGFGAALR AVLAFEASED EAIEQSVAKI LADVKSRGDA AVLEYTNRFD
RLSANSVAAL ELPQDALQTA LDGLAPKARA ALEAAAARVR AYHEKQKIEC GTHSWQYTES
DGTVLGQKVT PLDRVGLYVP GGKAAYPSSV LMNAIPARVA GVGEIVMVVP TPDGVKNDLV
LAAALLGGVD RVFTIGGAQA VGALAYGTET VPAVDKICGP GNAYVASAKR RVFGTVGIDM
IAGPSEILVL CDGTTDPNWV AMDLFSQAEH DELAQSILLC PDGTFLDRVE KAIGELLPTM
PRQDVIRASL EGRGALIKVR DMAEACRIAN DIAPEHLEIS ALEPQQWGQQ IRHAGAIFLG
RYTSESLGDY CAGPNHVLPT SRTARFSSPL GVYDFIKRSS LIEVSAEGAQ TLGEIASELA
YGEGLQAHAR SAEFRMKG
|
|---|
| |