Gene Bcenmc03_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0372 
SymbolaroB 
ID6122055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp406780 
End bp407859 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID641636930 
Product3-dehydroquinate synthase 
Protein accessionYP_001763674 
Protein GI170731727 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTG TCAACGTCGA TCTGGGCGAC CGCGCCTATC CGATTCATAT TGGCGCCGGC 
CTGATCGGCC GCACCGAACT GTTCGCGCCC CACATCAAGG GCTCGTCCGT CACGATCGTC
ACGAACACGA CGGTCGATCC GCTCTACGGC GACGCGCTGC GCGCGGCGCT CGCGCCGCTC
GGCAAGCGCG TGTCGACGGT CGTGCTGCCG GACGGCGAGG CGTACAAGAA CTGGGAAACG
CTGAACCTGA TCTTCGACGG CCTGCTGACG GATCACGCCG ATCGCAAGAC GACGCTCGTC
GCGCTCGGCG GCGGCGTGGT CGGCGACATG ACGGGCTTTG CCGCCGCGTG CTACATGCGC
GGCGTGCCGT TCATCCAGGT GCCGACGACG CTGCTGTCGC AGGTCGATTC GTCGGTCGGC
GGCAAGACGG GCATCAACCA CCCGCTCGGC AAGAACATGA TCGGCGCGTT CTACCAGCCG
CAGGCCGTGA TCGCGGACAT CGGCGCGCTG ACGACATTGC CCGATCGCGA GCTGGCGGCG
GGCGTGGCCG AAGTCATCAA GACGGGCGCG ATCGCCGATG CCGGGTTCTT CGACTGGATC
GAGGCGAACG TGGAGGCGCT GAACCGTCGC GAGCCGGCAG CGCTTGCGCA CGCGGTGAAG
CGTTCGTGCG AGATCAAGGC GAGCGTCGTC GCGGCCGACG AACGCGAAGG CGGCCTGCGC
GCGATCCTGA ACTTCGGCCA CACGTTCGGC CATGCGATCG AGGCCGGGCT CGGCTACGGC
GAATGGCTGC ACGGCGAGGC GGTCGGCTGC GGGATGGTGA TGGCGGGCGA TCTGTCGGTG
CGGCTTGGCC TCCTCGATGA AGCGTCGCGG CAGCGCCTCG ACGCGGTGAT CGCGGCCGCG
CATCTGCCGA CCCGCGGGCC CGCGCTCGGC GACGCGCGCT ACATGGACCT GATGCGCGTC
GACAAGAAGG CCGAGGCCGG CGCGATCAAG TTCGTCCTGC TGAAGCGATT CGGCGATACG
CTGATCACGC AGGCGCCGGA CGAAGCGGTA TTCGCTACAC TGGCGCAGAC GACGCGCTAA
 
Protein sequence
MITVNVDLGD RAYPIHIGAG LIGRTELFAP HIKGSSVTIV TNTTVDPLYG DALRAALAPL 
GKRVSTVVLP DGEAYKNWET LNLIFDGLLT DHADRKTTLV ALGGGVVGDM TGFAAACYMR
GVPFIQVPTT LLSQVDSSVG GKTGINHPLG KNMIGAFYQP QAVIADIGAL TTLPDRELAA
GVAEVIKTGA IADAGFFDWI EANVEALNRR EPAALAHAVK RSCEIKASVV AADEREGGLR
AILNFGHTFG HAIEAGLGYG EWLHGEAVGC GMVMAGDLSV RLGLLDEASR QRLDAVIAAA
HLPTRGPALG DARYMDLMRV DKKAEAGAIK FVLLKRFGDT LITQAPDEAV FATLAQTTR