Gene Bcenmc03_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0352 
SymbolrpsD 
ID6122035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp385662 
End bp386285 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content61% 
IMG OID641636910 
Product30S ribosomal protein S4 
Protein accessionYP_001763654 
Protein GI170731707 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.243977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGTT ATATCGGCCC CAAAGCCAAG CTGTCCCGCC GTGAAGGCAC CGACCTGTTC 
CTGAAGAGCG CACGCCGTTC GCTCGCCGAC AAGTGCAAGC TCGACAGCAA GCCGGGTCAG
CACGGCCGTA CCTCGGGCGC ACGTACGTCC GACTACGGTA CGCAGCTGCG CGAAAAGCAG
AAGGTCAAGC GGATCTACGG CGTGCTGGAG CGTCAGTTCC GTCGCTACTT CGCTGAAGCC
GATCGTCGCA AGGGCAACAC GGGTGAAAAC CTGCTGCAAC TGCTCGAGTC GCGCCTCGAC
AACGTCGTGT ATCGCATGGG CTTCGGCTCG ACCCGCGCTG AAGCGCGTCA GCTGGTGAGC
CACAAGTCGA TCACCGTGAA CGGCGTCGTC GCAAACGTCC CGTCGCAGCA AGTGAAGGCG
GGTGACGTCG TCGCGATCCG CGAAAAGGCG AAGAAGCAGG CGCGTATCGT TGAAGCGCTG
TCGCTGGCCG AGCAAGGCGG CATGCCGAGC TGGGTTGCAG TCGATGCGAA GAAGTTCGAA
GGCACGTTCA AGCAAATGCC GGAACGCGCT GAAATCGCAG GCGACATCAA CGAAAGCCTG
ATCGTCGAAT TGTATTCGCG TTAA
 
Protein sequence
MARYIGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRTSGARTS DYGTQLREKQ 
KVKRIYGVLE RQFRRYFAEA DRRKGNTGEN LLQLLESRLD NVVYRMGFGS TRAEARQLVS
HKSITVNGVV ANVPSQQVKA GDVVAIREKA KKQARIVEAL SLAEQGGMPS WVAVDAKKFE
GTFKQMPERA EIAGDINESL IVELYSR