Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0352 |
Symbol | rpsD |
ID | 6122035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 385662 |
End bp | 386285 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641636910 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001763654 |
Protein GI | 170731707 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.243977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACGTT ATATCGGCCC CAAAGCCAAG CTGTCCCGCC GTGAAGGCAC CGACCTGTTC CTGAAGAGCG CACGCCGTTC GCTCGCCGAC AAGTGCAAGC TCGACAGCAA GCCGGGTCAG CACGGCCGTA CCTCGGGCGC ACGTACGTCC GACTACGGTA CGCAGCTGCG CGAAAAGCAG AAGGTCAAGC GGATCTACGG CGTGCTGGAG CGTCAGTTCC GTCGCTACTT CGCTGAAGCC GATCGTCGCA AGGGCAACAC GGGTGAAAAC CTGCTGCAAC TGCTCGAGTC GCGCCTCGAC AACGTCGTGT ATCGCATGGG CTTCGGCTCG ACCCGCGCTG AAGCGCGTCA GCTGGTGAGC CACAAGTCGA TCACCGTGAA CGGCGTCGTC GCAAACGTCC CGTCGCAGCA AGTGAAGGCG GGTGACGTCG TCGCGATCCG CGAAAAGGCG AAGAAGCAGG CGCGTATCGT TGAAGCGCTG TCGCTGGCCG AGCAAGGCGG CATGCCGAGC TGGGTTGCAG TCGATGCGAA GAAGTTCGAA GGCACGTTCA AGCAAATGCC GGAACGCGCT GAAATCGCAG GCGACATCAA CGAAAGCCTG ATCGTCGAAT TGTATTCGCG TTAA
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Protein sequence | MARYIGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRTSGARTS DYGTQLREKQ KVKRIYGVLE RQFRRYFAEA DRRKGNTGEN LLQLLESRLD NVVYRMGFGS TRAEARQLVS HKSITVNGVV ANVPSQQVKA GDVVAIREKA KKQARIVEAL SLAEQGGMPS WVAVDAKKFE GTFKQMPERA EIAGDINESL IVELYSR
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