Gene Bcenmc03_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0328 
SymbolrplD 
ID6122011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp374432 
End bp375052 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID641636886 
Product50S ribosomal protein L4 
Protein accessionYP_001763630 
Protein GI170731683 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000930223 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0206029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA AGCTCCTGAA CGAAAATGGT CAGGAAGGTG CAGTGGTCAA CGCATCGGAC 
GTCGTGTTCG GTCGTGACTA CAACGAAGCG CTGATCCACC AGGTCGTCGT CGCTTACCAG
GCGAATGCTC GCCAGGGTAA CCGCGCACAG AAGGACCGTG AGCAAGTCAA GCACACGACC
AAGAAGCCGT GGCGCCAGAA GGGTACGGGC CGCGCTCGTG CCGGTATGTC GTCGAGCCCG
CTGTGGCGTG GCGGTGGTCG TATCTTCCCG AATTCGCCGG AAGAAAACTT CTCGCACAAG
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAGCT GGCCCGTGAA
GGCCGTCTGT CGGTCGTCGA GGACATCATC CTCGAAGCGC CGAAGACCAA GCTGCTGGCC
GACAAATTCA AGACCATGGG TCTCGACTCC GTGCTGATCA TCACCGACAC GGTCGACGAG
AACCTGTACC TGGCTTCGCG CAACCTGCCG CACGTGGCGA TTGTCGAGCC GCGCTACGCT
GACCCGCTGT CGCTGATCTA CTTCAAGAAA GTGCTGGTCA CGAAGGCTGC GGTCGCCCAG
ATCGAGGAGT TGCTGTCATG A
 
Protein sequence
MELKLLNENG QEGAVVNASD VVFGRDYNEA LIHQVVVAYQ ANARQGNRAQ KDREQVKHTT 
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSHK VNKKMHRAGL CSIFSQLARE
GRLSVVEDII LEAPKTKLLA DKFKTMGLDS VLIITDTVDE NLYLASRNLP HVAIVEPRYA
DPLSLIYFKK VLVTKAAVAQ IEELLS