| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0316 |
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| Symbol | rplA |
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| ID | 6121999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 355479 |
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| End bp | 356177 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641636874 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001763618 |
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| Protein GI | 170731671 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00176824 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.225661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA TCTCCAAGCG CCGTCAGGCA TTTGCCGCCA AGGTCGATCG TCAGAAGCTG
TACGCGATCG AAGACGCACT GAGCCTCGTG AAGGAATGCG CGAGCGCGAA GTTCGACGAG
TCGATCGACG TCGCGGTTCA GCTCGGCATC GACGCGAAGA AGTCGGACCA GGTCGTTCGT
GGTTCGGTCG TTCTCCCGGC AGGTACGGGC AAGTCGGTTC GCGTTGCCGT GTTCGCGCAA
GGCGAAAAGG CCGAGCAGGC GCGTGCAGCA GGCGCGGAAA TCGTCGGTAT GGAAGACCTG
GCTGAGCAGA TCAAGGCTGG CCAGATGGAC TTCGACATCG TGATCGCTTC GCCGGATACG
ATGCGTATCG TCGGTACGCT CGGTCAGATC CTGGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGTA CGGTCACGCC GGACGTCGCA ACCGCCGTCA AGAACGCGAA GGCTGGTCAG
GTGCAATTCC GTGTCGACAA GGCCGGTATC ATCCACGCGA CCATCGGCCG TGCATCGTTC
GAGCCGACCG CGCTGCGTTC GAACCTGTCG GCGCTGATCG AAGCGCTGCA GAAGGCGAAG
CCGGCAACGA GCAAGGGCGT GTACCTGCGC AAGATCGCAC TGTCGAGCAC GATGGGCGTC
GGCGTGCGTG TCGACCACGC TACGCTGGCA GCACAGTAA
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| Protein sequence | MAKISKRRQA FAAKVDRQKL YAIEDALSLV KECASAKFDE SIDVAVQLGI DAKKSDQVVR
GSVVLPAGTG KSVRVAVFAQ GEKAEQARAA GAEIVGMEDL AEQIKAGQMD FDIVIASPDT
MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRASF
EPTALRSNLS ALIEALQKAK PATSKGVYLR KIALSSTMGV GVRVDHATLA AQ
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