| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0289 |
|---|
| Symbol | |
|---|
| ID | 6121972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 317548 |
|---|
| End bp | 318831 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641636838 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001763591 |
|---|
| Protein GI | 170731644 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000369004 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000514998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGCC CTGCCAACCG TTGCTCCGCC CCCGTTTCGC CCGCCGTCGC GGCGCCGCCC
GCACTGAGCA CGGGCATGAC GCTGTTCTTC GCCGCGACGG TCGGCGTGAT CGTGATGGAC
CTGTTCGCCG CGCAGCCGCT GACCGGCCCG ATCAGCGCGG ACCTGCACCT GCCGCCCGGT
CTCGCCGGCC TCGTCGCGAT GCTGCCGCAG CTCGGCTACG CGGCCGGGCT CGCGTTGCTC
GTGCCGCTGG TCGACCTGCT CGAGAACCGG CGCCTGATCG TCGCGACGCT CGCCGTCTGC
GCGGCGGCGC TCGCGCTGCC CGCCTTCACG CAGTCGGGCG CCGTGTTCCT GCTTGCAACG
CTCGCGGCCG GCGCCGCGTC GAGCGTGATC CAGATGCTGG TGCCGATGGC CGCGTCGATG
GCGCCCGAAG CGCAGCGCGG CCGCGCGGTC GGCAACGTGA TGAGCGGGCT GATGCTCGGC
ATCCTGCTGT CGCGGCCGCT CGCGAGCCTG ATCGCGGGCT CGGCCGGCTG GCGGGCGTTC
TATCTGCTGG CCGCGCTCGC GGACGCGGCG ATCGCCGTCG TGCTCGCGCT GCGCCTGCCG
GCGCGCACGC CGTCGATCAC CGCCAGCTAC CGCGCATTGC TCGCGTCGAT GGGACGCCTG
CTTGCCGACG AGCCGGTGCT GCGCCGGCAT GCACTGTCGG CCGCGCTCGC GATGGCCGCG
TTCAGCGCGT TCTGGACCGC CGTCGGGCTG CGGCTCGCGC AACCGCCGTT CGCGCTCGAC
CTGCACGGCA TTGCGCTGTT CGCGTTCGCC GGCGCGAGCG GCGCGATCGT CACGCCGCTC
GCCGGCCGCG CGGGCGACCG CGGCCACGGC CCGGCCGCGC AACGGCTCGC GCACGGCACG
ATGCTCGCGG CGCTCGTCGT GCTCGGCGTC GCCGGCGCCG GCTGGTTCGG TTTCGATGCG
CATACGCATC GCGGCGTCGC GCTCGCGCTG CTGGCCGGCG GCGCGGCGCT GCTCGATGCG
GGCGTCATCG TCGACCAGAC GATCGGCCGC CGCGCGATCA ACCTGCTGAA CCCGGCCGCG
CGCGGACGCC TGAACGGACT GTTCGTCGGA CTGTTCTTCG TCGGCGGCGC GCTGGGTGCG
GCGCTCGCGG GCAGTGCATG GGCCTGGGGC GGCTGGAGCG CGGTGTGTGG TGTCGGGTTC
GCATTCGCCG GTGCGGCGGC CGTGTTCGGG CTGATGGCCG GCCGCGGAGC CGGCGCGGCG
GCGTGGGATC GGCCGGGTGC GTGA
|
|---|
| Protein sequence | MNCPANRCSA PVSPAVAAPP ALSTGMTLFF AATVGVIVMD LFAAQPLTGP ISADLHLPPG
LAGLVAMLPQ LGYAAGLALL VPLVDLLENR RLIVATLAVC AAALALPAFT QSGAVFLLAT
LAAGAASSVI QMLVPMAASM APEAQRGRAV GNVMSGLMLG ILLSRPLASL IAGSAGWRAF
YLLAALADAA IAVVLALRLP ARTPSITASY RALLASMGRL LADEPVLRRH ALSAALAMAA
FSAFWTAVGL RLAQPPFALD LHGIALFAFA GASGAIVTPL AGRAGDRGHG PAAQRLAHGT
MLAALVVLGV AGAGWFGFDA HTHRGVALAL LAGGAALLDA GVIVDQTIGR RAINLLNPAA
RGRLNGLFVG LFFVGGALGA ALAGSAWAWG GWSAVCGVGF AFAGAAAVFG LMAGRGAGAA
AWDRPGA
|
|---|
| |