Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0285 |
Symbol | |
ID | 6121968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 313861 |
End bp | 315066 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641636834 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001763587 |
Protein GI | 170731640 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.140483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000766037 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCCCGACC ACAATCTGGA CAAACTGAAA ATCGACCGGC GTCCGATCGC ACCGGTGCCG CGTCGGCGCC GGTGGGCCCG CTACGCGGTC GCCGCCGCGC TGATCGTCAT CGCGATCGTC GCCGGCCTCG CCCTCACCGG CCGGCCGACC GTCGACACCA CCTCCGTCAC GTCCGCCTAC CCGTACCAGA ACGACACGCA GCTCAATGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC GCGGTCGCGT CGAAGGGTCA GGGGCGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC GTGAAGCAGA ACGAGATCAT CGCGCGCCTC GAAAGCAACG ACGTGCAGGC GTCGCTTGCC CAGGCGCGCG CGCAGGTGCA GGTCTCCCGC GCCAACCTCG GCGTCGCGCA GGCCGAACTG AAGGACGCCG AGATCGCATT GCGCCGCACG TCCGCGCTCG CGCCGAAGGG CGCGGTGCCG GCCGCGCAGC TCGATACCGA CACGGCGCGC GTGAACAAGG CGCGCGCGAC GCTCGACAGC GACCAGGCCG CGATCGTGTC GGCCGAGGCG AATGCGCAGG CCGCGCAGGT GGCGGTCGAC CAGACGGTGA TCCGCGCGCC GTTCGACGGC ATCGTGCTCG CCAAACATGC GAACGTCGGC GACAACATCA CGCCGTTCTC GTCCGCGTCG GACAGCAAGG GCGCGGTCGT GACGATCGCC GACATGGAGA CGCTCGAGGT CGAGGCCGAC GTCGCCGAAT CGAACATCGC GAAGATCCGC GCGGAGCAGC CGTGCGAGAT CCAGCTCGAT GCGCTGCCCG ACCTGCGCTT CGCGGGCCGC GTGTCGCGCA TCGTGCCGAC CGTCGACCGC TCGAAGGCCA CCGTGCTCGT GAAGGTGCGC TTCGTCGACC GCGACGAGCG CGTGCTGCCC GACATGAGCG CGAAGATCGC ATTCCTGTCG AAGCCCGCGA CGCCGCAGGA CCGGCAGCCG GTGACCGCCG TGCAGGCGAG CGCCGTGGTC GAGCGCGACG GCCGGCCGGT CGTGTTCGTC GTGAAGGACG ACGCCGTGCA TGCGGTGGCC GTGACGAAGG GCACGCGGAT CGGCGAGCTC GTCGCGGTGC GCGGCGTGAA GCCCGGCGAC ACGGTCGTGC TCGCGCCGGG CGCGAAGCTG AAGGACGGCG CGAACGTGAC CGTCGCGAAG AAGTAG
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Protein sequence | MPDHNLDKLK IDRRPIAPVP RRRRWARYAV AAALIVIAIV AGLALTGRPT VDTTSVTSAY PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKQNEIIARL ESNDVQASLA QARAQVQVSR ANLGVAQAEL KDAEIALRRT SALAPKGAVP AAQLDTDTAR VNKARATLDS DQAAIVSAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA DMETLEVEAD VAESNIAKIR AEQPCEIQLD ALPDLRFAGR VSRIVPTVDR SKATVLVKVR FVDRDERVLP DMSAKIAFLS KPATPQDRQP VTAVQASAVV ERDGRPVVFV VKDDAVHAVA VTKGTRIGEL VAVRGVKPGD TVVLAPGAKL KDGANVTVAK K
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