| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0283 |
|---|
| Symbol | |
|---|
| ID | 6121966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 311981 |
|---|
| End bp | 313135 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641636832 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763585 |
|---|
| Protein GI | 170731638 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.568273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000204424 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTGC TGAAGCTGAT CGCGCGCAAC GCGCTGCGGC ACCGGCTGCG CACGCTCTTG
ACCGTGCTCG GGCTCACGAT CGCGGTACTC GCGTTCGGGC TGCTGCACAC CGTCGTCGAC
GCGTGGTACG CGGGCGCGGC GGCCGCGTCC AGCGGCCGGC TCGTCACGCG CAACGCGATC
TCGCTGGTGT TCCCGCTGCC GGTCAGCTAC GAGAACCGCA TCCGCGGCGT GGACGGCGTG
ACGGCCGTGG TGCGCTCGAA CTGGTTCGGC GGCATCTATC GCGACCCGAA GAACTTCTTC
GCGAGCTTCG CGGTGTCGGA CAACTATCTC GACCTGTATC CGGAATTCAT CCTGCCGGCG
CAGCAGCGCG CCGACTACGC CCGCGACCGC CGCGGCTGCC TCGTCGGCCG CCAGCTCGCG
ACGCAGTTCG GCTTCAAGGT CGGCGACGTG ATCCCGCTGA AGGGCACGAT CTATCCGGGC
ACGTGGGATT TCGTCGTGCG CGGCATTCTC GACGGTCGCG ACGATTCGAC GATCACGCGC
CAGCTGGTGT TCCACTGGGA CTACCTGAAC GAGACGGTGC GCAAGCGCAC GCCGAAACAG
GCCGACCAGG TCGGCGTGTT CGTGCTCGGC GTCGCGAACC CCGACGACGG CGCGTCGATC
GCGCGCAACG TCGACGCGGT GTTCAAGAAC TCGCTCGCCG AGACGCTGAC CGAGACCGAG
CAGGCGTTCC AGCTCGGCTT CGTCGCGATG TCGAACCAGA TCATCGCGGC GATCCGCCTG
GTGTCGTACG TGGTGATCCT GATCATCATG GCCGTGATGG CCAACGCGAT GGCGATGAGC
GCGCGCGAAC GCACGGCCGA ATATGCAACG CTGAAAGCGC TGGGCTTCGG CCCCTGGTTC
CTCGCGCTGA TCGTGTTCGG CGAATCGGTC GTGATCGCGG TGGCCGGCGG CGGGCTCGGG
ATTCTCGCGA CGCCGCCCGC CGCGAGCCTG TTCAAGCAGG CGGCCGGCGG CATCTTCCCG
GTGTTCAAGG TGTCGACCGA GACGGTCGTG CTGCAGGCCG CATGCTCGGT CGCGGTCGGC
TTCGCTGCGG CAATCGTGCC GGCGTGGCAG GCGGCGCGCG TGCGCGTCGT CGAAGGCCTG
CGGGCGATCG GGTAG
|
|---|
| Protein sequence | MFVLKLIARN ALRHRLRTLL TVLGLTIAVL AFGLLHTVVD AWYAGAAAAS SGRLVTRNAI
SLVFPLPVSY ENRIRGVDGV TAVVRSNWFG GIYRDPKNFF ASFAVSDNYL DLYPEFILPA
QQRADYARDR RGCLVGRQLA TQFGFKVGDV IPLKGTIYPG TWDFVVRGIL DGRDDSTITR
QLVFHWDYLN ETVRKRTPKQ ADQVGVFVLG VANPDDGASI ARNVDAVFKN SLAETLTETE
QAFQLGFVAM SNQIIAAIRL VSYVVILIIM AVMANAMAMS ARERTAEYAT LKALGFGPWF
LALIVFGESV VIAVAGGGLG ILATPPAASL FKQAAGGIFP VFKVSTETVV LQAACSVAVG
FAAAIVPAWQ AARVRVVEGL RAIG
|
|---|
| |