Gene Bcenmc03_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0261 
Symbol 
ID6121944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp290793 
End bp292010 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content73% 
IMG OID641636809 
Productmajor facilitator transporter 
Protein accessionYP_001763563 
Protein GI170731616 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.989591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCAAT CCTCTTCCCC CGAATCGTCG TCCCCGTTCG CCGCGCCGCC CGACGCGCAT 
CGCGTCCTGC CGCTGCCGGC CCGCCAGCGC GCGCGCACCG CGTCGATGGC GCTGTTCTTC
GTCGCCGGCA TGATGTACGC GTCGTGGGGC GTGCACGTGC CGACCGTGCG CGACAAGTTC
GCGCTGAGCC CCGGGCTGCT GTCGATCGCG CTGTTCGCGG TCGCCGGCGG GTCGATCGTC
GCGATGCTGA GCATCGCGCG CTGGATCGCG CGTGTCGGCT CGCGCACCGC GTGCCTCGCC
GGCGGCCTCG TGATGTCCGC GTGCGCGGCG CTGATCCTCG TCGTGCCCGA CTACTGGATG
CTGCTCGCGG TGCTCGCGCT GTTCGGCTTC TCGATGGCGA CGCTCGACGT CGCGATGAAT
GCCGAGGCCA GCGCGGTCGA AATCGCGCTC GGCAAACCGA TCATGTCGTC GCTGCACGGG
ATGTTCAGCA TCGGCGGGAT GGCCGGCGCT GCGGCCGGCG GCGCGCTGCT GTCGGCCGGC
ATGGCGCCGG CCGCGCATCT GGCGCTCGCG GCGGCGGTGG GCGCCGCGGT GCTCGTGGCC
GCGAGCCCGG CCGTGCTGCC GCACGTGCCG CATCACGAAC AGGCGCACGG CGGCGGCAAC
CGCTGGCGCT CGCCCGCGTT GTGGATGCTC GGCGGCATCG CGCTGATCGC ACTGATCGCC
GAAGGCGCGA TGTACGACTG GGCGACGGTC TACATGCGCG ACGTGGTCGC GGCGAGCCCC
GCGCTCGCGA GTGCCGCGTA TGCGGCGTTC TCGGGCGGGA TGGCCGTCGC GCGCTTCGCG
GGCGACGCCG TGCGCGCCCG CTTCGGCGCG CCGCAGCTCG TGTTCGCGAG CGCGTCGCTC
GCCTGCGCGG GGATGATCGG CGCGCTGCTG CTGCCGTATT CGGCCGCGGT GCTGACCGGT
TTCACGCTGA TGGGCCTCGG GCTGGCCAAC ATGATGCCCG TGCTGTTCGC GGCTGCCGCG
CGCGTAAAAG GCATCCACGC GGCCGAAGGG CTCGCGCACG TGGCCGGGCT CGCGTATTTC
GGACTGCTGT TCGGTCCGGT CGCGATCGGC GCGGTCGCGC AGGCGTCGAA CCTGACGGTC
GGCCTGTCGG TCGTCGCGCT GTGCGCGGCG CTCGTCGCAC TCGTCGCGCC GAAGGTGCTC
GCGCACCTGA AGATCTGA
 
Protein sequence
MSQSSSPESS SPFAAPPDAH RVLPLPARQR ARTASMALFF VAGMMYASWG VHVPTVRDKF 
ALSPGLLSIA LFAVAGGSIV AMLSIARWIA RVGSRTACLA GGLVMSACAA LILVVPDYWM
LLAVLALFGF SMATLDVAMN AEASAVEIAL GKPIMSSLHG MFSIGGMAGA AAGGALLSAG
MAPAAHLALA AAVGAAVLVA ASPAVLPHVP HHEQAHGGGN RWRSPALWML GGIALIALIA
EGAMYDWATV YMRDVVAASP ALASAAYAAF SGGMAVARFA GDAVRARFGA PQLVFASASL
ACAGMIGALL LPYSAAVLTG FTLMGLGLAN MMPVLFAAAA RVKGIHAAEG LAHVAGLAYF
GLLFGPVAIG AVAQASNLTV GLSVVALCAA LVALVAPKVL AHLKI