Gene Bcenmc03_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0242 
Symbol 
ID6121925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp269701 
End bp270444 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID641636790 
Productchemoreceptor glutamine deamidase CheD 
Protein accessionYP_001763544 
Protein GI170731597 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.137526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC TGCCGATCGC GACCAATCGC TACTTCGACA ACCACTTCGA GCGCCCCGGC 
GTGAAGCTGT TGCCGAACGA GTTCTACACG ACCGCCGAGG ACATGGTGCT GATGACCGTG
CTCGGCTCGT GCGTCGCCGC GTGCCTGCAC GACCCGTACG CGGGCATCGG CGGGATGAAT
CACTTCATGC TGCCGGACGA CGGCGCCGAT CCGGGCGCGG CCGCGTCGGA ATCGATGCGC
TACGGCGCGT ATGCGATGGA AGTGCTGATC AACGAGCTGA TCAAGGCCGG CGGGCGCCGC
GAGCGCTTCG AGGCGAAGGT GTTCGGCGGC GCGGCCGTGC TGGCCGGGAT GACGACGATC
AACATCGGCG ATCGCAACGC GGATTTCGTG CGCCGCTATC TCGCGCTCGA GCGCATCCGC
ATCACCGCGG AAGACCTGCA GGGCGTGCAT CCGCGCAAGG TCGCGTTCAT GCCGCACAGC
GGGCGAGCGA TGGTGAAGAA GCTGCGGCTG CAGGTGCCGG GGGTGACCGA GCGCGAAGCC
GCGCTCGCGC GCGAGGCCGA TCGCCTCCGC GCCGCACGGA CCCGCGCGCA GGTCGAGCTG
TTCGCCGCGA AGCGGCCTGC CGCGCCGCAA CCGGCGCGCC CGCGCATCGA GCTGTTCGGC
GGGCGCGGCA CGACGCCGGG CGCCGGGAGC CAGGCCGCGG GGAGCCCGTA CGCCGCGAAC
CTATCAAGAA AGCAGGAGGC CTGA
 
Protein sequence
MSALPIATNR YFDNHFERPG VKLLPNEFYT TAEDMVLMTV LGSCVAACLH DPYAGIGGMN 
HFMLPDDGAD PGAAASESMR YGAYAMEVLI NELIKAGGRR ERFEAKVFGG AAVLAGMTTI
NIGDRNADFV RRYLALERIR ITAEDLQGVH PRKVAFMPHS GRAMVKKLRL QVPGVTEREA
ALAREADRLR AARTRAQVEL FAAKRPAAPQ PARPRIELFG GRGTTPGAGS QAAGSPYAAN
LSRKQEA