| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0220 |
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| Symbol | |
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| ID | 6121903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 244048 |
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| End bp | 246387 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641636768 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001763522 |
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| Protein GI | 170731575 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.991207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCGA CCGAACTGCC CGCCTCCGCC GCGCTCACGC CTGAACAGCA GCTTGCGCAG
GACATTGCGC TCGTCATGGA GAACGCACTC GAGCGCCAGC GCAGCGGCGC GTTCGACGAC
GCCCGGGCGC TGTACGAGGC CATCCTCGAC GCAGTGCCCG CGCATGGCGA TGCGCATTAC
AACCTCGCGG TGCTGCTGGC CGATACGGGT CAGGCGGCTG ATGCCGTACC GCATTTCGAA
GCCGCCATCG GCGCCAGCCC GGACAACGGC TACTACTGGG TTAGCTACAT TCACGCGCTG
CATCGCAGCG GGCAGACGGC CGCCGCGTGG ATCGCGGTCG AAATCGCGCA ACAGCGCGGC
GTGCACGGTC CCGCGCTGAA CAGCCTGATC GCCCAATTGG CGTCACCCGA CATCGTGCTC
GCAACTGCAG CGGTCGCGGC CGCCCCAAGC GGCATCGACG CAGCGATCGT CCTGGAAACC
GCGGCCGGGC GAAGCGACTC CGGCAAGTCT GCCCGCCGCC CCAATCAGAC GCTGCTGCAA
AAGCACGCAG CGCTGTTCGC CAAGAACAGG CATGCGGAAG CCACCGCGCT TGCGCGGAAA
CTGGTCGCCG ACTACCCGGA AGACGGCGCA TGCTGGCGAG CGCTGTCCGC CTCGCTTCAC
CGGGAAGGCC GCTTCGCGGA GATGATCGAG GCAGGCTTTC GCACGGTCGA ATTGCTGCCG
GATGAAGTCC TCGTGCGCAT CCTGCTCGCG GATACGCTAC GGGCGATGAA CCGTCTCTCG
GAAGCAGACG AGCAGTGCAC GCGCCTGTAC CAGCTTCAGC CCGATCACCA GGAGGCCATG
CGGATTCGCG GTCTCGTGCT GTTCGCGCTG CGCCGCACGG ATGAAGCGCT CGCGGCCTGC
CGGCGCGCGG TCGAACTCGC GCCCGGCGCC GCCGCGCCAT GCGGCACGCT CGGCTTCGTG
CTGCTCGAAA TGGGCGCAAC GCAGGAAGCG ATAGGCTGGC TGAAGCGCGC GATCGAAATC
AACCCTACCG ACAGCGTCAC CCACAGCAGC ATGCTGTTCT GTATCGCGCA TAGCAGCGAA
TTCGATCCGC AAGCGCTCGT TGCGGAACAC CGCAAGTTCG GCGCGCGCTA CGACAATCAA
AAGCGCAAGC GCGCGGCCGT GTTCTCGAAC CCGCGCGATC CGGCGCGCAA GCTGCAGGTC
GGCTTCGTGT CGGGCGACCT GTTCGGCCAC GCGGTCGCCT CCTACGCAGT GCCCGTGATC
GAGCATCTCG CCACCGATCC CGGTATCGCG ATGCACTTCT ATCACAATCA CTTCGAGGAA
GATTCGACCT CCGAACGCTT CAAGGCCCAC GCGACGACCT GGCGTAACGT CGCCGGCATG
AGCGATACGG CCTTCCTCGA ACGCGTGCGC AACGACGGCA TCGACATCGT GATCGATCTG
TCGGGCCATA CCGGCCGCAA CCGGCTCGTT GCGCTCGCGC AGCGCGCGGC GCCGGTTCAG
GCGTCGTGGA TCGGCTATCC GGCCACGACC GGGCTCGCCG CAATGGACTA CTACCTGACG
GACCGCTTCG TCGCGCCGCA CGGCGCATTC GACGACCAGT TCGTCGAGCA GCTCGTGCGG
CTGCCCGCGA TCGCGCCGTT CATGCCGGCG CCGAACTGCC CGCCCGTGAA CGTGCTGCCC
GCGCTACACA ACGGCTATAC GACGTACGCG AGCTTCAACC GCCTGAACAA GCTGAGCCCG
CACGTGATCG AGGTGTGGGC GCGCGTGCTG CACGCGGACC CGACCGCTCG CATGGCGCTC
GGCGCGATCG GCAGCGAAGG TGACAAGCAG ACGCTGACCG AATGGTTCGC CGCCGCCGGC
ATCGACGCCA GTCGCCTGTC GTTCCACCGG CGCTCGAACA TCCCCGTTTA CATGCAGCAG
CATCACGGCG TCGACCTCTG TCTCGACGCA TTCCCGTACA CCGGTTCGAC GACCACGCTG
AATGCGCTGT GGATGGGCGT GCCGACCGTG ACGATCCCCG GCGCGACGAT GGCCGGGCGC
GGTAGCGCGG GCTGGCTGCA GCACGTCGGG CTCGATGCGT ACATCGCGAA GGACGAGGAC
GACTTCGTCG CGCGGGCGCT GGCGCTCGGC CGCGACACCG CCGCGCTGCA GGCGCTTCGC
GCCGGCCTGC GCGCGCGCTG CGGGGAATCC GCCGCGTTCC GGCCGGCCGT CGTCGCGGCC
GGGCTGTCGT CCGCGCTGCG CACGATGTGG ACCCGCTGGT GCGCGGGAGA GCCCGTCACC
GCATTCGACA CGCCGCTGTT CGACGACGTG GCAACCGCAC CGGCCGCGAC CGAGGCCTGA
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| Protein sequence | MFSTELPASA ALTPEQQLAQ DIALVMENAL ERQRSGAFDD ARALYEAILD AVPAHGDAHY
NLAVLLADTG QAADAVPHFE AAIGASPDNG YYWVSYIHAL HRSGQTAAAW IAVEIAQQRG
VHGPALNSLI AQLASPDIVL ATAAVAAAPS GIDAAIVLET AAGRSDSGKS ARRPNQTLLQ
KHAALFAKNR HAEATALARK LVADYPEDGA CWRALSASLH REGRFAEMIE AGFRTVELLP
DEVLVRILLA DTLRAMNRLS EADEQCTRLY QLQPDHQEAM RIRGLVLFAL RRTDEALAAC
RRAVELAPGA AAPCGTLGFV LLEMGATQEA IGWLKRAIEI NPTDSVTHSS MLFCIAHSSE
FDPQALVAEH RKFGARYDNQ KRKRAAVFSN PRDPARKLQV GFVSGDLFGH AVASYAVPVI
EHLATDPGIA MHFYHNHFEE DSTSERFKAH ATTWRNVAGM SDTAFLERVR NDGIDIVIDL
SGHTGRNRLV ALAQRAAPVQ ASWIGYPATT GLAAMDYYLT DRFVAPHGAF DDQFVEQLVR
LPAIAPFMPA PNCPPVNVLP ALHNGYTTYA SFNRLNKLSP HVIEVWARVL HADPTARMAL
GAIGSEGDKQ TLTEWFAAAG IDASRLSFHR RSNIPVYMQQ HHGVDLCLDA FPYTGSTTTL
NALWMGVPTV TIPGATMAGR GSAGWLQHVG LDAYIAKDED DFVARALALG RDTAALQALR
AGLRARCGES AAFRPAVVAA GLSSALRTMW TRWCAGEPVT AFDTPLFDDV ATAPAATEA
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