Gene Bcenmc03_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0208 
Symbol 
ID6121891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp230293 
End bp231345 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID641636756 
ProductPBSX family phage portal protein 
Protein accessionYP_001763510 
Protein GI170731563 
COG category[R] General function prediction only 
COG ID[COG5518] Bacteriophage capsid portal protein 
TIGRFAM ID[TIGR01540] phage portal protein, PBSX family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.761483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.444243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCA AGTATCGACG CGGCGCCGGG CGCCGCACGC ACGGCCGCGC CGAGGCGGAG 
GCCGGTTCGA TGCCGACGCC GGCGCCGCGC GCGGAGGTTT TCTCGTTCGG CGATCCGGTC
GAAGTGATGG ATCGGCGCGA GCTGCTCGAG TATGTTGAAT GCATGCGGAT GGGGAACTGG
TACGAGCCGC CGCTGCCGCT CGACGGGCTG GCCCGCTCGT TCCGGGCGGC GCCACACCAC
AGCTCGGCCA TCTACGTGAA GCGCAACATC CTCGTGCAGT CGTATGTTGA GCATCCGCTA
CTGTCGCGCG CCGACTTCAG CCGGTTCGTG CTCGAGTACC TGGTCTTCGC GAACAGCTAC
CTCGAGCTGC GCACGAACCA GCTCGGCACG CCGATGGCGC TGAAGTCTTC GCTCGCGAAG
TACACGCGCG TTGGCGTCGA ACCGGGTCAA TACTGGTTCG TGACGAACGT GCGCGAGCCG
TACGAGTTCC CGAAGGGCTC GGTCTATCAC CTGTTCGAGC CGGACCTGAA CCAGGAGATT
TACGGGCTGC CCGAATACCT GTCGGCGCTG AACTCGACCT GGCTGAACGA AAGCGCGACG
CTGTTTCGCC GGCGCTACTA CAAGAACGGG AGCCACGCGG GCTTCATCCT GTACATGACC
GATGCGGCCG AGAAGCAGGA GGATGTCGAT AACCTGCGCT CGGCGTTGAA GAACGCGAAG
GGGCCTGGCA ATTTCCGGAA CCTGTTTATG TACGCGCCGA AGGGGAAGAA GGACGGCATC
CAGCTCCTGC CGATCGGCGA GGTTGCGGCG AAGGACGAGT TCTGGAACAT CAAAAAGGTG
ACGGTCGAGG ATCAGCTTGC GGCGCACCGC GTGCCGCCGC AACTGATGGG GATCATCCCG
TCGAACGCGG GCGGGTTCGG TGACGTGGAG AAGGCGGCCG GGGTATTCAA TGGCCTCGAG
ATCGAGCCGC TGAAGGCGCG GCTCCGGGAG CTGAACGACT GGATCGGGAT CGAGGTTGTG
CGCTTCCGCC CGTACGTGCC GCCGGCGCAG TGA
 
Protein sequence
MSRKYRRGAG RRTHGRAEAE AGSMPTPAPR AEVFSFGDPV EVMDRRELLE YVECMRMGNW 
YEPPLPLDGL ARSFRAAPHH SSAIYVKRNI LVQSYVEHPL LSRADFSRFV LEYLVFANSY
LELRTNQLGT PMALKSSLAK YTRVGVEPGQ YWFVTNVREP YEFPKGSVYH LFEPDLNQEI
YGLPEYLSAL NSTWLNESAT LFRRRYYKNG SHAGFILYMT DAAEKQEDVD NLRSALKNAK
GPGNFRNLFM YAPKGKKDGI QLLPIGEVAA KDEFWNIKKV TVEDQLAAHR VPPQLMGIIP
SNAGGFGDVE KAAGVFNGLE IEPLKARLRE LNDWIGIEVV RFRPYVPPAQ