Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0195 |
Symbol | |
ID | 6121878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 220219 |
End bp | 221988 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641636743 |
Product | hypothetical protein |
Protein accession | YP_001763497 |
Protein GI | 170731550 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.520308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0593303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACAGGG TCGACCCGAT TAACCGATTA CCCGCCAAGG GGGCTTGTAT GGCATATATT GACGCATTCA AGGCGAATTC GAATCTGATC AAAAACTTGG GAGAAGGAAA CGCTTACCTT GTCTGGGTGG TCGCAATGTA CCTTGAAGAG CCGGATATCG AAGCTCTGGC TTCCGAGGCG CTTACGGATG GACCAGACGA CAAGAAGATC GATTTGATCT ACATTGATCG TGATAACCGT CGAATCTTGT TTTCGCAAGG TTATTTGGGG GAGGGTAAAA AAGATGCCGC TCCTGCCAAC AAGGCTTCGG ATCTGAATAC CGCCAGTGCA TGGTTGTTGT CAGGCGATGT TAGTCAGGTT CCCACGGCAT TGCAGTCTTC CATTACAGAA TGCCGAGAGG CGCTAGCCAA CGGGGAGGTT GACAGTGTGG AGCTTCTCTA TGTGCATAAC TATCCTGAGT CAGTAAACGT CGCGAAGGAA CTGCAGACAG CATCAGCTCA TTTCAAAAAA TCGCTCGACG CCGAATGGGC GGTCAGTGTT ACTGCGCGAG AACTGGGAGC AGCGCGCATC GAGCATCTTT TCGCTAGTCA GGAATCCCAG ATTCAGGTGA AAGATGAGTT GATCTGCCCG GCGAAAATCG CATTTACCGA GACTGGACCC AAATGGGAAG CGGCCGTAAT GTCGGTGCCG GGCACATGGT TACATGAGCT ATACGCAAAA TATGGTGACG ATCTATTTTC CGCTAATTAT CGAGGTTTTT TGGGAATTAG CAGGCGAAAA CGAATCAACA GCGGAATTCG TCAGACGGCA GAGGTGAAGC CGGCAGATTT CTGGGTTTTC AATAATGGAA TCACGTTGAT AACCTTAGGG AAAAGTGATA CGAAGGATGG CCAGACAAAA CTGACCGGCG TATCGATAAT CAATGGCGCA CAGACAACTG GTTCGCTCGG CACTGTTGAT GCAACGAAGA ACGACTTGAA AAGCGTTAAG GTTATGTGTC GAGTTATACA ATCCACCGAC CCCGAAACTA TTGGTGATAT TGTCAAGTAC AACAACACTC AAAATGAAAT TACTACGTGG GATCAATACA GTAACGATTC GGAGCAAAAC CGTATCGCGG ATGAATTTTC GGCGATAGGA CATAACTACG TACGCAAGCG CGGCTTTAGG GTACAAGGGG ACCAGATTGG GATCGAGGAA GTCGCACAGC CGCTACTTGC GTTCCACGGT AGACCGCAAG ATGCGGCGCG CGGAAAGAAT CAAATTTTTG ACCGTAAGCC GCTCTATCAC AATGCCTTTG AAGGTAAGAA GGCACGCCAC ATCCTGTTCG TCTACACGCT CGCGCGAGCT ATTGACGATT TGCGACTCCA ACTTAAAGGC AAATCCACCG ACGGAACGAT TCTGTCACTC GAGAGCAATC AGCTTGCCCT TCTAAGGAAC CTTCGCTCGA AAGCATTCTT GATTGCGCTA ATGGCTCAAA CACTGGAAAC AGTGATTGGA AAGAAGGTCG ACCCGCTTAC AATTGCCTTT TCGTCCAATG CAGCGCAGGC CGGAACTAAC AGTCTCGTCG AACTGGTTGC TCGCTGGCTT CCGATCGTTA CAGGATTGGC GGCCTTCGCA ACGACCATTG TCACATCGGC AGATCTCAGC AACTCCTTCG GGGACGATAA GTACTTGGAA GAAGTTGCGA GCAAAATTTC AGCTTTGCAA TACGCGAGTA ACGTAGCCAC TCAACACAAA GAATTCGCAG CACTTGTTTC GGATAGCTAG
|
Protein sequence | MHRVDPINRL PAKGACMAYI DAFKANSNLI KNLGEGNAYL VWVVAMYLEE PDIEALASEA LTDGPDDKKI DLIYIDRDNR RILFSQGYLG EGKKDAAPAN KASDLNTASA WLLSGDVSQV PTALQSSITE CREALANGEV DSVELLYVHN YPESVNVAKE LQTASAHFKK SLDAEWAVSV TARELGAARI EHLFASQESQ IQVKDELICP AKIAFTETGP KWEAAVMSVP GTWLHELYAK YGDDLFSANY RGFLGISRRK RINSGIRQTA EVKPADFWVF NNGITLITLG KSDTKDGQTK LTGVSIINGA QTTGSLGTVD ATKNDLKSVK VMCRVIQSTD PETIGDIVKY NNTQNEITTW DQYSNDSEQN RIADEFSAIG HNYVRKRGFR VQGDQIGIEE VAQPLLAFHG RPQDAARGKN QIFDRKPLYH NAFEGKKARH ILFVYTLARA IDDLRLQLKG KSTDGTILSL ESNQLALLRN LRSKAFLIAL MAQTLETVIG KKVDPLTIAF SSNAAQAGTN SLVELVARWL PIVTGLAAFA TTIVTSADLS NSFGDDKYLE EVASKISALQ YASNVATQHK EFAALVSDS
|
| |