| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0129 |
|---|
| Symbol | |
|---|
| ID | 6121812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 153101 |
|---|
| End bp | 154240 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641636676 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001763431 |
|---|
| Protein GI | 170731484 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.212558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACA CGATGAAAAA GGTGGCAGGC GCGACGTTCG TCGCGGTCAT GTCGCTGGCG
GGGACGGCTC ATGCGGATGA CGTGAAGATT GGTTACGCAG GGCCGATGAC GGGCGCGCAG
GCGCACTACG GCAAGGATAT GCAGAACGGG ATCGTGCTCG CGCTGGAAGA CTTCAACGCG
ACGAACCCGA AGATCGGCGG CAAGGCCGTG AAGTTCGTGC TCGACACGCA GGACGACCAG
GCTGACCCGC GCACGGGTAC GACGGTTGCG CAGAAGCTGG TCGACGACGG CATCAAGGGC
ATGCTCGGCC ACTTCAACTC GGGCACGACG ATTCCGGCTT CGCGCATCTA CGCGAACGCG
GGCATTCCGG AAATCGCGAT GGCGACGGCG CCGGAATACA CGCAGCAGGG TTACAAGACG
ACCTTCCGCA TGATGACGTC CGACACGCAG CAGGGCTCGG TGGCCGGCAC GTTCGCGTCG
AAGGATCTCG GCATGAAGAA GATCGCGATC GTCGACGACC GCACGGCCTA CGGCCAGGGT
CTCGCCGACC AGTTCGAGAA AGCCGCGAAG GCCGGCGGCG CGACGATCGT CGACCGTGAA
TTTACGAACG ACAAGGCCGT CGATTTCAAG GCGATTCTCA CGAAGCTGAA GGCAGCGAAG
CCGGACCTCG TCTACTACGG CGGCGCGGAT TCGCAGGCAG CGCCGATGGT CAAGCAGATG
AAGACGCTCG GCATCACCGC CCCGCTGATG AGCGGCGAAA TGGTGAAGAC GCCGACGTTC
CTGAAGATCG CGGGCAACGC GGCCGAAGGC ACGATCGCAT CGCTGGCCGG CCTGCCGCTG
GAAGAAATGC CGGGCGGCAA GGCTTACGCC GACAAGTACA AGAAGCGCTT CGGCGAAGAC
GTGCAGACGT ACTCGCCGTA CGCGTACGAC GGCGCGATGG CGATGCTGAA CGCGATGAAG
AAGGCCGATT CGACCGATCC GGCGAAGTAC CTGCCGGTGC TCGCGAAGAC CGACATGGCT
GGTGTGACGT CGACGCACGT CGCGTACGAC GCGAAGGGCG ACCTGAAGAA CGGCGGCATC
ACGATGTACA AGGTAGAGAA GGGCGACTGG AAGCCGCTGA AGAGCATCGG CGGCAAGTAA
|
|---|
| Protein sequence | MQHTMKKVAG ATFVAVMSLA GTAHADDVKI GYAGPMTGAQ AHYGKDMQNG IVLALEDFNA
TNPKIGGKAV KFVLDTQDDQ ADPRTGTTVA QKLVDDGIKG MLGHFNSGTT IPASRIYANA
GIPEIAMATA PEYTQQGYKT TFRMMTSDTQ QGSVAGTFAS KDLGMKKIAI VDDRTAYGQG
LADQFEKAAK AGGATIVDRE FTNDKAVDFK AILTKLKAAK PDLVYYGGAD SQAAPMVKQM
KTLGITAPLM SGEMVKTPTF LKIAGNAAEG TIASLAGLPL EEMPGGKAYA DKYKKRFGED
VQTYSPYAYD GAMAMLNAMK KADSTDPAKY LPVLAKTDMA GVTSTHVAYD AKGDLKNGGI
TMYKVEKGDW KPLKSIGGK
|
|---|
| |