Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0103 |
Symbol | |
ID | 6121786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 117829 |
End bp | 119028 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641636650 |
Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001763405 |
Protein GI | 170731458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.32797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGA AGACCCTCGC ACAGGCCTGT CTCGCGCTCG CGACCGCCGC GCTCACCGCC GGCGCCGCCC ACGCGGCGGA TACCGTGAAG ATCGGCTTCA TCACCGACAT GTCGGGGCTT TACGCGGATA TCGACGGGCA GGGCGGCCTC GAGGCGATCC GCATGGCGGT CGCGGACTTC GGCGGCAAGG TGCTCGGCAA GCCGATCGAG GTCGTCTATG CCGACCACCA GAACAAGGCC GACATCGCCG CGTCGAAGGC GCGCGAATGG ATGGACCGCG GCGGCCTCGA CCTGCTGGTC GGCGGCACGA ACTCGGCCAC CGCGCTGTCG ATGAACCAGG TCGCGGCCGA GAAGAAGAAG GTCTACATCA ACATCGGCGC GGGCGCCGAC ACGCTGACCA ACGAGCAGTG CACGCCGTAC ACGGTCCACT ACGCGTACGA CACGATGGCG CTCGCGAAGG GCACCGGGTC GGCGGTGGTG AAGCAGGGCG GCAAGAGCTG GTTCTTCCTG ACGGCCGACT ACGCGTTCGG CAAGGCGCTC GAGAAGAACA CGTCGGACGT CGTGAAGGCG AACGGCGGCC AGGTGCTCGG CGCGGTGCGT CACCCGCTGT CCGCGTCGGA TTTCTCGTCG TTCCTGTTGC AGGCGCAATC GTCGAAGGCG CAGATCCTCG GCCTCGCGAA CGCGGGCGGC GACACGATCA ACTCGATCAA GGCCGCGAAG GAATTCGGCA TCACGAAGAC GATGAAGCTC GCCGCGCTGC TGATGTTCAT CGACGACGTG CACAGCCTCG GCCTCGAAAC GACGCAGGGC CTCGTGCTGA CCGACAGCTG GTACTGGAAC CGCGACGCGG CGTCGCGCCA GTGGGCGCAG CGCTACTTCG GCAAGATGAA GAAGATGCCG TCGAGCCTGC AGGCGGCCGA CTACTCGTCG GTGACGACCT ACCTGAAGGC CGTGCAGGCC GCCGGGACGA CCGACTCCGA CAAGGTGATG GCCGAGCTGA AGAAGATCAA GATCAGCGAC TTCTACGCGA AGGGCTACAT CCGTCAGGAC GGCAGCATGA TCCACGACAT GTACCTGATG GAAGTGAAGA AGCCGTCCGA ATCGAAGGAG CCGTGGGACT ACTACAAGGT GCTCGCGACG ATTCCGGGCG AACAGGCGTT CGGCACCAAG CAGGAAACGC GCTGCGCGCT GTGGAAGTAG
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Protein sequence | MKMKTLAQAC LALATAALTA GAAHAADTVK IGFITDMSGL YADIDGQGGL EAIRMAVADF GGKVLGKPIE VVYADHQNKA DIAASKAREW MDRGGLDLLV GGTNSATALS MNQVAAEKKK VYINIGAGAD TLTNEQCTPY TVHYAYDTMA LAKGTGSAVV KQGGKSWFFL TADYAFGKAL EKNTSDVVKA NGGQVLGAVR HPLSASDFSS FLLQAQSSKA QILGLANAGG DTINSIKAAK EFGITKTMKL AALLMFIDDV HSLGLETTQG LVLTDSWYWN RDAASRQWAQ RYFGKMKKMP SSLQAADYSS VTTYLKAVQA AGTTDSDKVM AELKKIKISD FYAKGYIRQD GSMIHDMYLM EVKKPSESKE PWDYYKVLAT IPGEQAFGTK QETRCALWK
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