Gene Bcenmc03_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0103 
Symbol 
ID6121786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp117829 
End bp119028 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID641636650 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001763405 
Protein GI170731458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.32797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGA AGACCCTCGC ACAGGCCTGT CTCGCGCTCG CGACCGCCGC GCTCACCGCC 
GGCGCCGCCC ACGCGGCGGA TACCGTGAAG ATCGGCTTCA TCACCGACAT GTCGGGGCTT
TACGCGGATA TCGACGGGCA GGGCGGCCTC GAGGCGATCC GCATGGCGGT CGCGGACTTC
GGCGGCAAGG TGCTCGGCAA GCCGATCGAG GTCGTCTATG CCGACCACCA GAACAAGGCC
GACATCGCCG CGTCGAAGGC GCGCGAATGG ATGGACCGCG GCGGCCTCGA CCTGCTGGTC
GGCGGCACGA ACTCGGCCAC CGCGCTGTCG ATGAACCAGG TCGCGGCCGA GAAGAAGAAG
GTCTACATCA ACATCGGCGC GGGCGCCGAC ACGCTGACCA ACGAGCAGTG CACGCCGTAC
ACGGTCCACT ACGCGTACGA CACGATGGCG CTCGCGAAGG GCACCGGGTC GGCGGTGGTG
AAGCAGGGCG GCAAGAGCTG GTTCTTCCTG ACGGCCGACT ACGCGTTCGG CAAGGCGCTC
GAGAAGAACA CGTCGGACGT CGTGAAGGCG AACGGCGGCC AGGTGCTCGG CGCGGTGCGT
CACCCGCTGT CCGCGTCGGA TTTCTCGTCG TTCCTGTTGC AGGCGCAATC GTCGAAGGCG
CAGATCCTCG GCCTCGCGAA CGCGGGCGGC GACACGATCA ACTCGATCAA GGCCGCGAAG
GAATTCGGCA TCACGAAGAC GATGAAGCTC GCCGCGCTGC TGATGTTCAT CGACGACGTG
CACAGCCTCG GCCTCGAAAC GACGCAGGGC CTCGTGCTGA CCGACAGCTG GTACTGGAAC
CGCGACGCGG CGTCGCGCCA GTGGGCGCAG CGCTACTTCG GCAAGATGAA GAAGATGCCG
TCGAGCCTGC AGGCGGCCGA CTACTCGTCG GTGACGACCT ACCTGAAGGC CGTGCAGGCC
GCCGGGACGA CCGACTCCGA CAAGGTGATG GCCGAGCTGA AGAAGATCAA GATCAGCGAC
TTCTACGCGA AGGGCTACAT CCGTCAGGAC GGCAGCATGA TCCACGACAT GTACCTGATG
GAAGTGAAGA AGCCGTCCGA ATCGAAGGAG CCGTGGGACT ACTACAAGGT GCTCGCGACG
ATTCCGGGCG AACAGGCGTT CGGCACCAAG CAGGAAACGC GCTGCGCGCT GTGGAAGTAG
 
Protein sequence
MKMKTLAQAC LALATAALTA GAAHAADTVK IGFITDMSGL YADIDGQGGL EAIRMAVADF 
GGKVLGKPIE VVYADHQNKA DIAASKAREW MDRGGLDLLV GGTNSATALS MNQVAAEKKK
VYINIGAGAD TLTNEQCTPY TVHYAYDTMA LAKGTGSAVV KQGGKSWFFL TADYAFGKAL
EKNTSDVVKA NGGQVLGAVR HPLSASDFSS FLLQAQSSKA QILGLANAGG DTINSIKAAK
EFGITKTMKL AALLMFIDDV HSLGLETTQG LVLTDSWYWN RDAASRQWAQ RYFGKMKKMP
SSLQAADYSS VTTYLKAVQA AGTTDSDKVM AELKKIKISD FYAKGYIRQD GSMIHDMYLM
EVKKPSESKE PWDYYKVLAT IPGEQAFGTK QETRCALWK