| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0085 |
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| Symbol | mnmC |
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| ID | 6121768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 98370 |
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| End bp | 100301 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641636632 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001763387 |
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| Protein GI | 170731440 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC GACTTGTTTC CGCCACGCTC GCGCTTCGCG ACGACGGCAC GCTCGTCTCG
CCCGAGTTCG GCGAGCTTCA TCGCGGTGCA TCCGGCACGC TCGCTCGCGC GCATCGCACG
TTCGTCGCGG GCAACGGGCT GCCCGCGCGC TGGCAGCGGC GCCGAACGTT CACGATCGTC
ACGACCGCGT TCGGCGCGGG CGCCGGCTTC CTCGCGGCCT GGGCCGCGTG GCGCGACGAT
CCCGCGCGCT GCGAGCGGCT GCACGTCGTC GCGGTCGAAC CGCATCCGTT CTCGCGCGAC
GACCTGCACC GTGCGGTCTC GCATATGGTT GCAGACACAA CCATATCGGC AGACGTCGAC
GCGTTGCTCG ATGCCTGGCC GATGCGGGTA CCGGGCCTGC ATCGGCTCGA ATTCGACGCA
GGGCGCGTGG TGCTCACGCT CGCGTTCGGC GATACGATCG ACTTGTTGAA GAAGCTCGTC
GCGCGCGCCG ACGCGTTTTT TCTCGACGGC GCCGCGGCAT CGAGCGACGG GATTCGCGCA
CTCGCGAAAC TCGCCGGCGA ACACGCGACG TTTGCGACAC ATGCAAAGTC CGACGACGTG
AAACACGCGC TCGGCGAAAC AGGTTTCACG TTCCGCGAAG TCGACGATCG GCTCGTCGGC
GACTATGCGC CGCGCTGGCG CGCGCGCCGG CACGAGCCGC CGCGTGCGCT GCCCGTTACG
ACGCGCCGCG CGATCGTGAT CGGCGCGGGT CTCGCCGGCT GCGCGGTGGT CGAACGTCTG
GCCGCGCGCG GCTGGGACGT CACGCTGATC GAACGGCACG AACGGATCGC GAGCGAAGCG
TCGGGCAATC CGGCCGGTGT GTTCCATCCA TTGATGACGC GCGACGACAA CGTCGCGAGC
CGGCTCACGC GCGGCGGCTT CCTGCACGCG CTCGCCCGCT GGCGCGCCCT CGAACGCGCG
GGGCATGCAT TCTCACGCAG CACGCACGGG ATGCTCCATC TCGCCGAATC GGCCGATGAT
TTCGCGCGGA TGCGCGACGC GTTCGACGCG TTCGGGGCGC CGTCCGACTA CGCGACGCTG
CTCGATGCCG ATGCCGCGCG GGCGCACCTG AATCTGCCGG TCGCGCAGGG CGGCCTGCTG
TTTCCGCACG GCGGCGCCGT GTGGCCGGCC GGGCTGTGCG CCGCGCAGTA TGCGGCGGCC
GGCGAGCGCG TGCGGCTGCT GGCGTCCACC TGCGTCGCAC GGCTCGAACG GCGGGACGAC
ACCTGGCATG CACTCGACGA TACGGGCGCC ACGCTGGCCG ATGCGCCCGT CGTCGTGCTC
GCGAACGCGG GCGACGCCGC GCGTCTTGCC GGGCTGCGGC ACGTCGCGCT GCAACCGGTG
CGCGGCCAGC TCACGCTGTT GCCGCCGGGC ACGACGGCAC CGCTGCCGTG CCCGGCGATC
GGCGACGGTT ACGCGGTCCC GCTCGACGAC GGCACGCTGC TGATCGGCGC CACCTTCGAA
CCGGACGACA CCGATCCCGC GATGCGCGCG GCCGGCCACG CCGAAAACCT CGATCGCGTG
CGGCACCTGC TGCCGGGCCT GATCGGCGCG CTGCCGGATC CCGCCACGCT GCGCGGGCGC
GTCGCATTCC GCTGGGTCGT CGGCGACCGC CTGCCGCTCA TCGGCCCGCT CGCCGACGAA
ACGCAGGCCA CCGCGAACGC ACGCGCGCTG GGCGGTGCGC AGGCGCGCGA CCTGCCGCGC
ATGCCGGGCC TCTACGGCGC CTTCGGCTTC GGTTCGCGCG GCCTCGTGTG GGCCGCGCTC
GGCGCCGAAC TCATCGCATC GCAACTCGAA GGCGAGCCCT GGCCGCTCGA GCGCGAACTC
GCCGACGCCG TCGATCCCGC CCGCTTCCTG ATCCGCGCAC TGCGCGCCCG CCGCGTCGGC
TCGGCTGGCT GA
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| Protein sequence | MPDRLVSATL ALRDDGTLVS PEFGELHRGA SGTLARAHRT FVAGNGLPAR WQRRRTFTIV
TTAFGAGAGF LAAWAAWRDD PARCERLHVV AVEPHPFSRD DLHRAVSHMV ADTTISADVD
ALLDAWPMRV PGLHRLEFDA GRVVLTLAFG DTIDLLKKLV ARADAFFLDG AAASSDGIRA
LAKLAGEHAT FATHAKSDDV KHALGETGFT FREVDDRLVG DYAPRWRARR HEPPRALPVT
TRRAIVIGAG LAGCAVVERL AARGWDVTLI ERHERIASEA SGNPAGVFHP LMTRDDNVAS
RLTRGGFLHA LARWRALERA GHAFSRSTHG MLHLAESADD FARMRDAFDA FGAPSDYATL
LDADAARAHL NLPVAQGGLL FPHGGAVWPA GLCAAQYAAA GERVRLLAST CVARLERRDD
TWHALDDTGA TLADAPVVVL ANAGDAARLA GLRHVALQPV RGQLTLLPPG TTAPLPCPAI
GDGYAVPLDD GTLLIGATFE PDDTDPAMRA AGHAENLDRV RHLLPGLIGA LPDPATLRGR
VAFRWVVGDR LPLIGPLADE TQATANARAL GGAQARDLPR MPGLYGAFGF GSRGLVWAAL
GAELIASQLE GEPWPLEREL ADAVDPARFL IRALRARRVG SAG
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