| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0069 |
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| Symbol | |
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| ID | 6121752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 81991 |
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| End bp | 83562 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641636616 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001763371 |
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| Protein GI | 170731424 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTACG CCTCCCTCCC GCGCGCCGTT CGCCCGCTGA GCGCCGCCGT CGCCATTGCG
ACGGCCGTGC TGCTCGCCGG CTGCGCCGTC GGGCCCGACT ATCACCGCCC CGACACGTCG
ATCCCCGCCG CGTTCAAGGA AGCGCCGGCC GGCTGGAAAG TCGCGCAACC CGCCGATCGC
GCCGACCGCG GCGCGTGGTG GACGGTCTAC AACGATCCGC AGCTCGATGC GCTGATCGGC
AGGCTCAACG CGTCGAACCA GACCATCGCG CAATCGGCGG CCGCCTACCG GCAGGCGCGC
GCGCTCGTCA CCGAGGCACG CGCCGCGTAT TTCCCGACCG TCGGGCTGAC CGCATCGGGC
TCGCGCGCAC GGACGCCGCG CACGTCGCTG TCGTCGGGTT CGTCGTCGAA TTTTGGCAGC
GGGTCGACCG GATCGATCAA CAACAGCTAC AGCGTCGGCC TCGACGCCAG TTGGGAACCC
GACCTGTGGG GCAAGGTGAG CCGTACCGTC AGCGCGCAGC GCGCCGGCGA AGCGGCCGCC
GCGGCCGATC TCGCGAACGC GCGGCTGTCG CAGCAGGCGC TGCTCGCGCA GACCTATTTC
CAGTTGCGTA CGTCCGATGC GCTGCAAAAG CTGCTCGACG ACACCGTGAA GTCGTATGAA
CGCTCGCTGC AGCTCACGCA GAACCAGTAC GCGCAGGGCG TCGCCGCGCG CGCCGACGTG
ATCCAGGCGC AAACGCAGCT GCAGAGCGCG CAGGCCGCGC AGATCGACAA CGGCGTCGCC
CGCGCGCAGT ACGAGCATGC GATCGCGACG CTGATCGGCG AGCCCGCATC GACCTTCTCG
CTGCCGCCGA ATCCGCTCGC GGCCGAGCCG CCGGTCACGC CGGTCGACGT GCCGTCCGCG
ATCCTCGAGC GCCGGCCCGA CATCGCGGCG GCCGAGCGCC GCGCGGCGGC CGCGAACGAG
CAGATCGGCG TCGCGATCTC GGCGTTCTTC CCGACGCTCA CGCTGTCGGC CACCGGCGGC
TTCCAGAGCT CGGTGTGGTC GCAGCTGTTC ACGCTGCCGG CGCGCTTCTG GACGGTCGGC
CCGCAGCTTG CGGCCACGCT GTTCGACGCG GGGCTGCGCG CCGCGCAGAC CGATGCCGCG
CGCGCCACCT ACGACCAGGA CGTCGCCGCC TATCGCCTCG CGGTGCTCAC CGCGTTCCAG
GACGTCGAGG ACAACCTCGC GTCGCAGCGC ATTCTCGCGC AGGAAATCGA CGTGCAGCGG
CAGGCCGTCG ACAGCGCCGA GCACGCGCTC GCGATCGTCA CGAACCAGTA CAAGGCCGGC
ACGGTCGCGT ACCTGAACGT GCTGACCGCG CAGACCACCG CGTTCACCGC GCAGCAAAAG
CTCGCGACGA TCGCCGGGCA GCGGATGGTG TCGTCGGTCG GGCTCGTGAA GGCGCTCGGC
GGCGGCTGGA ACGTATCGGA GATGGCGCGC GAGAACGGCG ACATGGCGGC GCCGGCGCCC
TTGCCGGCGT CCGGTGCGGC CGCGCCCGCG GCCACCGCAC CGTCGGTCGC CGCGCCGCTC
GCGCAGAAGT AG
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| Protein sequence | MPYASLPRAV RPLSAAVAIA TAVLLAGCAV GPDYHRPDTS IPAAFKEAPA GWKVAQPADR
ADRGAWWTVY NDPQLDALIG RLNASNQTIA QSAAAYRQAR ALVTEARAAY FPTVGLTASG
SRARTPRTSL SSGSSSNFGS GSTGSINNSY SVGLDASWEP DLWGKVSRTV SAQRAGEAAA
AADLANARLS QQALLAQTYF QLRTSDALQK LLDDTVKSYE RSLQLTQNQY AQGVAARADV
IQAQTQLQSA QAAQIDNGVA RAQYEHAIAT LIGEPASTFS LPPNPLAAEP PVTPVDVPSA
ILERRPDIAA AERRAAAANE QIGVAISAFF PTLTLSATGG FQSSVWSQLF TLPARFWTVG
PQLAATLFDA GLRAAQTDAA RATYDQDVAA YRLAVLTAFQ DVEDNLASQR ILAQEIDVQR
QAVDSAEHAL AIVTNQYKAG TVAYLNVLTA QTTAFTAQQK LATIAGQRMV SSVGLVKALG
GGWNVSEMAR ENGDMAAPAP LPASGAAAPA ATAPSVAAPL AQK
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