Gene Bcenmc03_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0054 
Symbol 
ID6121737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp71283 
End bp72065 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID641636601 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_001763356 
Protein GI170731409 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCGG TCACCTACGC GCAGCTCAAC GGCTGGCTCA CGGCGTTCCT GTGGCCGTTC 
GTGCGGATGC TCGCGCTCGT CGCGACGGCG CCCATGGTCG GCCACGCGGC CGTGCCGGTG
CGCGTGAAGA TCGGCGTCGC TGCATTCATG GCGCTCGTCG TCGCGCCGAC GCTCGGTGCG
ATGCCGGACG TCACCGTATT CTCCGCGCAG GGCATCTGGA TCCTCGTCAA TCAATTCCTG
ATCGGCGTCG CGATGGGTTT CACGATGCAG CTCGTGTTCG CGGCCGTCGA AGCGGCCGGC
GACTTCATCG GGCTGTCGAT GGGGCTCGGC TTCGCGACCT TCTTCGATCC GCATTCGAGC
GGTGCGACGC CCGCGATGGG CCGGTTCCTG AACGCGGTCG CGATGCTCGC GTTCCTCGCG
GTGGACGGCC ATCTGCAGGT GTTCGCGGCG CTCGCCGCGT CGTTCCAGTC GCTGCCGGTG
TCGGCCGACC TGCTGCACGC ACCGGGCTGG CGCACGCTCG CCGCATTCGG CGCGACCGTG
TTCGAGATGG GACTGCTGCT GTCGCTGCCG GTGGTCGTGG CGCTGCTGAT CGCGAACCTC
GCGCTCGGCA TCCTGAACCG CGCGGCGCCG CAGATCGGCA TGTACCAGAT CGGCTTTCCC
GTCACGCTGA TCGTCGGGCT GTTGCTCGTG CAACTGATGA TCCCGAACCT CGTGCCGTTC
GTGTCGCATC TGTTCGACAT GGGGCTCGAT GCGATGGGGC GGGTGTTGAT CGGCTGGCGC
TAG
 
Protein sequence
MFSVTYAQLN GWLTAFLWPF VRMLALVATA PMVGHAAVPV RVKIGVAAFM ALVVAPTLGA 
MPDVTVFSAQ GIWILVNQFL IGVAMGFTMQ LVFAAVEAAG DFIGLSMGLG FATFFDPHSS
GATPAMGRFL NAVAMLAFLA VDGHLQVFAA LAASFQSLPV SADLLHAPGW RTLAAFGATV
FEMGLLLSLP VVVALLIANL ALGILNRAAP QIGMYQIGFP VTLIVGLLLV QLMIPNLVPF
VSHLFDMGLD AMGRVLIGWR