| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0054 |
|---|
| Symbol | |
|---|
| ID | 6121737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 71283 |
|---|
| End bp | 72065 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641636601 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_001763356 |
|---|
| Protein GI | 170731409 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCGG TCACCTACGC GCAGCTCAAC GGCTGGCTCA CGGCGTTCCT GTGGCCGTTC
GTGCGGATGC TCGCGCTCGT CGCGACGGCG CCCATGGTCG GCCACGCGGC CGTGCCGGTG
CGCGTGAAGA TCGGCGTCGC TGCATTCATG GCGCTCGTCG TCGCGCCGAC GCTCGGTGCG
ATGCCGGACG TCACCGTATT CTCCGCGCAG GGCATCTGGA TCCTCGTCAA TCAATTCCTG
ATCGGCGTCG CGATGGGTTT CACGATGCAG CTCGTGTTCG CGGCCGTCGA AGCGGCCGGC
GACTTCATCG GGCTGTCGAT GGGGCTCGGC TTCGCGACCT TCTTCGATCC GCATTCGAGC
GGTGCGACGC CCGCGATGGG CCGGTTCCTG AACGCGGTCG CGATGCTCGC GTTCCTCGCG
GTGGACGGCC ATCTGCAGGT GTTCGCGGCG CTCGCCGCGT CGTTCCAGTC GCTGCCGGTG
TCGGCCGACC TGCTGCACGC ACCGGGCTGG CGCACGCTCG CCGCATTCGG CGCGACCGTG
TTCGAGATGG GACTGCTGCT GTCGCTGCCG GTGGTCGTGG CGCTGCTGAT CGCGAACCTC
GCGCTCGGCA TCCTGAACCG CGCGGCGCCG CAGATCGGCA TGTACCAGAT CGGCTTTCCC
GTCACGCTGA TCGTCGGGCT GTTGCTCGTG CAACTGATGA TCCCGAACCT CGTGCCGTTC
GTGTCGCATC TGTTCGACAT GGGGCTCGAT GCGATGGGGC GGGTGTTGAT CGGCTGGCGC
TAG
|
|---|
| Protein sequence | MFSVTYAQLN GWLTAFLWPF VRMLALVATA PMVGHAAVPV RVKIGVAAFM ALVVAPTLGA
MPDVTVFSAQ GIWILVNQFL IGVAMGFTMQ LVFAAVEAAG DFIGLSMGLG FATFFDPHSS
GATPAMGRFL NAVAMLAFLA VDGHLQVFAA LAASFQSLPV SADLLHAPGW RTLAAFGATV
FEMGLLLSLP VVVALLIANL ALGILNRAAP QIGMYQIGFP VTLIVGLLLV QLMIPNLVPF
VSHLFDMGLD AMGRVLIGWR
|
|---|
| |