Gene Bcenmc03_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0046 
Symbol 
ID6121729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp59311 
End bp62337 
Gene Length3027 bp 
Protein Length1008 aa 
Translation table11 
GC content68% 
IMG OID641636593 
Producttype III restriction protein res subunit 
Protein accessionYP_001763348 
Protein GI170731401 
COG category[V] Defense mechanisms 
COG ID[COG3587] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGC ATTTCGAAGC GGATCTCGAC TACCAGCGCG AGGCGATCGA CGCCGTCTGC 
GACCTGTTTC GCGGCCAGGA ATCGTATCGC GGCGACTTCA GCGTGCTCGC GAACGCCGCG
CCCGGCACGA CGGCCGCCGC GCAAGGCTCG CTCGGCTTCG CGGTATCGGA GCAAGGCGTC
GGTAACCGGC TGTCGCTGAC CGACGACGCG CTCGCGCGCA ATCTCGCCGA CGTGCAACTG
CGCGGCGGCC TGCCGCCGTC TGGCCTGCCC GGCTCGCGCG ATTTCACCGT CGAGATGGAG
ACCGGCACCG GCAAGACCTA CGTGTACCTG CGCACGATCT TCGAGCTGAA CCGCCGTTAC
GGCTTCACGA AATTCGTGAT CGTCGTGCCG TCGATCGCGA TCAAGGAAGG CGTGCACAAG
ACGCTCTCGA TCACCGAGGA TCACTTCCGC GCGCTGTACG CGGGCGTGCC GTACGACTAC
TTCCTGTACG ACTCCGCGAA GCTCGGCCAG GTGCGCCATT TCGCGGCGAG CGCGGCGATC
CAGATCATGG TGATGACGGT CGCCGCGATC AACAAGAAAG AGATCAACAA CCTCTACAAG
GACAGCGAGA AGACCGGCGG CGAGAAGCCG ATCGACCTGA TCCGCGCGAC GCGGCCGATC
GTGATCGTCG ACGAGCCGCA GAGCGTCGAC GGCGGCCTCG AAGGGCGCGG GCGCGAAGCG
CTCGCCGCGA TGGCGCCGCT CTGCACGCTG CGCTATTCGG CCACACACGT CGACCGCCAC
CACATGGTGT ACCGGCTCGA TGCGGTCGAC GCGTACGAGC GCAAGCTCGT CAAGCAGATC
GAGATCGCGT CGGCGATCGT CGAGGATGCA CACAACAAGC CGTACGTGCG GCTCGTCGGC
GTGTCGAACC GGCGCGGCGC GATCAGCGCG CGCGTCGAAC TCGACGTCGC GACGGCGGCC
GGCGTGAAGC GCCAGATCGT GTCGGCCACC GACGGCGACG ATCTCGAACG CCTGACCAAG
CGCGCGCTGT ACGCGGGGCT GCGGATCGGC GAAGTGCATG CGGTCAAGGG CGCCGAATAC
GTGGAGCTGC GCCATCCGGA AGGCGAGGCG TTCCTGTCGC TCGGCGAGGC GTTCGGCGAC
ATCGACACGC TCGCCGTGCA GCGCGAGATG ATCCGCCGCA CGATCCGCGA GCATCTCGAC
AAGGAATTGC GCCTGGCCGA GCGCGGCGTG AAGGTGCTGT CGCTGTTCTT CGTCGATTCG
GTCGAGCGCT ATCGCCGCTA CGACGAGAAC GGCATGCCGG TGAAGGGCGA CTACGCGCTG
ATCTTCGAAG AGGAATATGC GCGTGCGGCG CGCGTGCCGG CCTACCGTGC GCTGTTCGAC
GGCGTCGACG TCGCGCTGGA AGTCGAGCGT GCGCACAACG GCTACTTCTC GATCGACCGC
AAGGGCGGCT GGACCGACAC GAGCGAAAGC AGCGCGGCGG CCCGCGAGAA CGCGGAGCGC
GCATACGGCC TGATCATGCG CGAGAAGGAA GCGCTGCTGT CGTTCGACAC GCCGCTGAAG
TTCATCTTCT CGCACTCGGC GCTGAAGGAA GGCTGGGACA ACCCGAACGT GTTCCAGATC
TGCACGCTGC GCGACATTCA GACCGAGCGC GAGCGCCGCC AGACGCTCGG CCGCGGGCTG
CGCCTCGCGG TCGATCAGGA TGGCGAACGC GTGCGCGACC CGGGCGTCAA CACGCTCACC
GTGATCGCGA CCGAGCGCTA CGAGTCGTTC GCGGAAAACC TGCAGAAGGA AATCGAGGCC
GATACGGGCA TCCGTTTCGG GATCGTCGAG GAACACCAGT TCGCGGCGCT GCCGGTGCAG
GAAGACGACG GCCCCGCGCA TGCGCTCGGC ATCGAGCCGT CGCGCGTGCT GTGGAACCAT
CTGCACGAGC AGGGCTACGT CGATGCGCAG GGCAAGGTGC TCGACCGGCT GAAGGATGCG
CTGCGCCAGA GCGCGCTCGT GCTGCCGGAT GCATTCGAGC GGCTGCGTGC GCCGATCGTC
GCGACGCTGC GCAAGCTGTC GGGCCGCTTC GCGGTGCGCA ATGCCGACGA GCGCCGCGCG
ATCGCATTGC GGCGCGATGC ATCGGGCAAG GCCGTCGTGT TCGGCGAGGA TTTCCGCGCG
CTGTGGGATC GCATCCGCCA TCGCACCGTG TACCGCGTCG AGTTCGACAA CGCGAAGCTG
GTGCGCGACT GCACGGCCGC GTTGCGTGAC GCGCCGGACA TCGCACGGGC GCGGCTGCAG
TGGCGCAAGG CCGAGATCGA CATCGGCAAG GCCGGCATCG AGGCGATCGA GGTGGCCGGC
GCCGGCACCG TGCTGCTCGA CGAAGGCGAA TTGCCGCTGC CCGACCTGCT CACCGAGCTG
CAGGACCGCA CGCAGCTCAC GCGCCGTTCG CTCGCGACGA TTCTCGCCGA CAGCGGCCGG
CTCGACGATT TCCGCGTGAA TCCGCAACAG TTCATCGCGG TCGCGGCCGA TGCGATCAAT
CGCTGCAAGC GGCTCGCGCT GGTCGCGGGC ATCGCGTACC GCAAGCTCGG CGAGCGCCAC
GTGCATGCGC TCGAATCGTT CGAGAGCGAG GCGCTGACCG GCTATCTGCG CAACCTGCGG
CCCGATGCAC GCAAGTCGAT CCACGAAGCG GTCGTGTGCG AGACGGACGC AGAGCGCGCG
TTCGCCGATG CGCTCGAAGC GCACGACGGC GTCAAGCTGT ACGCGAAGCT GCCGGCGTGG
TTCCGCGTGC AGACGCCGCT CGGCAGCTAT CACCCGGACT GGGCCGTGCT CGCGGAACAG
GACGGCGGCG AGCGGCTGTA CTTCGTCGTC GATACGCCGA ATGCCGACGG CCACGTGCCG
AGCGAGCACG AGCGCGCGAA GCTCGCGTGC GGGGAAGCGC ATTTCCGTGC GCTGGTCGAG
GGCGACGGCG CGGCGCGCTT CGTGCGGGTC AGGCAGGCCG ATGCGTTGTT CGAACCTGCG
GTGCCGACGG CAGGCGCGGG GCGGTGA
 
Protein sequence
MRLHFEADLD YQREAIDAVC DLFRGQESYR GDFSVLANAA PGTTAAAQGS LGFAVSEQGV 
GNRLSLTDDA LARNLADVQL RGGLPPSGLP GSRDFTVEME TGTGKTYVYL RTIFELNRRY
GFTKFVIVVP SIAIKEGVHK TLSITEDHFR ALYAGVPYDY FLYDSAKLGQ VRHFAASAAI
QIMVMTVAAI NKKEINNLYK DSEKTGGEKP IDLIRATRPI VIVDEPQSVD GGLEGRGREA
LAAMAPLCTL RYSATHVDRH HMVYRLDAVD AYERKLVKQI EIASAIVEDA HNKPYVRLVG
VSNRRGAISA RVELDVATAA GVKRQIVSAT DGDDLERLTK RALYAGLRIG EVHAVKGAEY
VELRHPEGEA FLSLGEAFGD IDTLAVQREM IRRTIREHLD KELRLAERGV KVLSLFFVDS
VERYRRYDEN GMPVKGDYAL IFEEEYARAA RVPAYRALFD GVDVALEVER AHNGYFSIDR
KGGWTDTSES SAAARENAER AYGLIMREKE ALLSFDTPLK FIFSHSALKE GWDNPNVFQI
CTLRDIQTER ERRQTLGRGL RLAVDQDGER VRDPGVNTLT VIATERYESF AENLQKEIEA
DTGIRFGIVE EHQFAALPVQ EDDGPAHALG IEPSRVLWNH LHEQGYVDAQ GKVLDRLKDA
LRQSALVLPD AFERLRAPIV ATLRKLSGRF AVRNADERRA IALRRDASGK AVVFGEDFRA
LWDRIRHRTV YRVEFDNAKL VRDCTAALRD APDIARARLQ WRKAEIDIGK AGIEAIEVAG
AGTVLLDEGE LPLPDLLTEL QDRTQLTRRS LATILADSGR LDDFRVNPQQ FIAVAADAIN
RCKRLALVAG IAYRKLGERH VHALESFESE ALTGYLRNLR PDARKSIHEA VVCETDAERA
FADALEAHDG VKLYAKLPAW FRVQTPLGSY HPDWAVLAEQ DGGERLYFVV DTPNADGHVP
SEHERAKLAC GEAHFRALVE GDGAARFVRV RQADALFEPA VPTAGAGR