| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0040 |
|---|
| Symbol | |
|---|
| ID | 6121723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 54158 |
|---|
| End bp | 55384 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641636587 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763342 |
|---|
| Protein GI | 170731395 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.793849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCC TAGCATCCCA GCTTCAGCGC TGTTACCAGG ACGTGCGCGC CCATAGCGTC
GCGTTGACCG CGACGCTGTC CGCCGAAGAC CAGGCCGTGC AGTCGATGCC CGACGCGAGC
CCGACCAAAT GGCATCTCGC GCATACGACC TGGTTCTTCG AAACCGTCGT GCTGATGCGC
CGCGTGCCCG GCTACGCGCC GTTCGACGAC GCATTCCAGT TCCTCTTCAA TTCCTATTAC
GAAGCGCTCG GTCCGCGCCA TCCGCGGCCG CAGCGCGGGC TGCTCACGCG TCCGTCGCTC
GACGAGGTGC ATGCGTACCG GCAATACGTC GATGACGCGA TGCTGCGCGC GCTGGCCGGC
GCCGATGCGG CGCTGCTCGA CGCGATCGCG CCCGAGCTCG TGCTCGGCCT GCATCACGAG
CAGCAGCACC AGGAGCTGAT CGTCACCGAC ATGCTGCATG CGTTCTCGTG CAACCCGCTG
CGGCCGGCAT TTCGGCCGCG CACGGGCGAC GAAGCCGGAT GCGCGCTCGC CGCGGGCGAC
GCCGGCCCGT TGCGCTGGCT GCACCAGCCC GGCGGGCTCG TCGAGATCGG CCACGATGGC
GATGCGTTTT CGTTCGACAA CGAACGGCCG CGTCACACCG CGCTCGTGCG GCCGTACGAG
ATCGCGAACC GCCTGGTGAC GAACGCGGAA TTCGCGGCGT TCATTGCCGA CGGCGGCTAT
ACGCGCCCGG AATTCTGGCT GTCCGACGGC TGGGCCACGG TGCAGCGGGA AGGGTGGCAA
GGGCCCGCGT ACTGGATGCC GGACGACGAC GATGCGGCCG CCACGCGCGT GCGACGCACG
TTCGGCCTGC ACGGCGTCGA GCCGCTCGCG CCCGACGCGC CGGTGTGCCA CGTGAGCTTC
TACGAGGCGG CCGCGTATGC GGAATGGGCC GGCGCGCGGC TGCCGACCGA ATTCGAATGG
GAAACCGCGT TCGCGGCCGA CGGCATCCGC CAGATGCTCG GGCACGTCTG GCAGTGGACG
CGTTCGTCGT ACGAGCCGTA TCCGGGCTTT CGGCCGCTCG CCGGGGTCGC GGCCGAATAC
AACGGCAAGT TCATGGTCGG CCAGCAGGTC CTGCGCGGCA GCAGCATCGC GACGCCGCCC
GGGCACGAAC GGCCGACGTA CCGCAATTTC TTTCCGCCGG CGGCACGCTG GCAATTCACG
GGGGTGCGAC TTGCGCGAGA CGTCTGA
|
|---|
| Protein sequence | MSLLASQLQR CYQDVRAHSV ALTATLSAED QAVQSMPDAS PTKWHLAHTT WFFETVVLMR
RVPGYAPFDD AFQFLFNSYY EALGPRHPRP QRGLLTRPSL DEVHAYRQYV DDAMLRALAG
ADAALLDAIA PELVLGLHHE QQHQELIVTD MLHAFSCNPL RPAFRPRTGD EAGCALAAGD
AGPLRWLHQP GGLVEIGHDG DAFSFDNERP RHTALVRPYE IANRLVTNAE FAAFIADGGY
TRPEFWLSDG WATVQREGWQ GPAYWMPDDD DAAATRVRRT FGLHGVEPLA PDAPVCHVSF
YEAAAYAEWA GARLPTEFEW ETAFAADGIR QMLGHVWQWT RSSYEPYPGF RPLAGVAAEY
NGKFMVGQQV LRGSSIATPP GHERPTYRNF FPPAARWQFT GVRLARDV
|
|---|
| |