Gene Bcenmc03_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0039 
Symbol 
ID6121722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp53101 
End bp53577 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID641636586 
Productalkylhydroperoxidase 
Protein accessionYP_001763341 
Protein GI170731394 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGA AACTCAATCC GTTTGCCGCC GCCCCCGCGC TGATGAAGAG CTGGATGACC 
GTGTCGGTCG CCGCGGCCGG GAGCCTCGAG CCGACGCTGA TCGAGCTGGT CAAGATCCGT
GCATCGCAGA TCAACGCGTG CGCGAACTGC CTTAACATGC ACACCGTCGA GGCGCGCGAA
CAGGGCGAGA CCGAGCAGCG CATCTACCTG CTGTCCGCGT GGCGCGAAGC GCCCTGCTAC
ACCGACCGCG AACGCGCGGC GCTCGGCTGG ACCGAGGCGC TCACGCGGCT GTCGGAGGGC
CACGCGGCGC ACGCAGCGGC CTACGCGGCG CTGAACGACC ATTTCAGCGA GGAGGAACAG
GTGAAACTCA CGGTGATGAT CAACGTGATC AACGGCTGGA ACCGGCTCGC CGTCGGCTTC
GGGCTGTGGG TCGACCCGGC CGACGCGAAG GCCGCCGCCG CGAAGATGGT GGCCTGA
 
Protein sequence
MTAKLNPFAA APALMKSWMT VSVAAAGSLE PTLIELVKIR ASQINACANC LNMHTVEARE 
QGETEQRIYL LSAWREAPCY TDRERAALGW TEALTRLSEG HAAHAAAYAA LNDHFSEEEQ
VKLTVMINVI NGWNRLAVGF GLWVDPADAK AAAAKMVA