Gene Bcenmc03_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0038 
Symbol 
ID6121721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp52220 
End bp53101 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content68% 
IMG OID641636585 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_001763340 
Protein GI170731393 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACC TCGACCCGGC CAGCGCCAGC GCCGACGATC GGGCCGACGC GGCGGCGAGC 
TTCGATCCGC TGCGTCGCAC ACTGATCCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG
GATGCCGAGG ACATGGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA CCGTACCGAG
GTGCGCGTGC CCGAGGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGACCAGTTG
AAGTCCGCGC GGCGCCAGCG CGAGACCTAT ATCGGCCCGT GGCTGCCCGA GCCGGTCGTC
GAGGAAGACG AACAGGACGA CGTCACGCTG CCGCTGCTGC TCGCGCTCGA ACGGCTCTCG
CCGCTCGAAC GCGCGGCGTT CCTGCTGCAC GACGTGTTCG GCCTCGAATT CGACGAAGTG
GCCACGACGA TCCAGCGCGA CCCGGCCGCC TGCCGGCAAC TCGCCGCGCG GGCCCGCACG
CACGTGCGCG AGGCGCGACC GCGTTTTCAT GTCGAGAAGC AGCGCGGGAT CGAACTGGCC
GAAGCGTTCT TCGCGGCGTC ACGCAGCGGC GACATGCGCG CGCTCGGCGC GATGCTTGCG
GAGGACGTGA GCCTGCATTC CGACGGCGGC GGCAAACGTA CGGCTGCGGC CAAGCCGGTG
TTCGGCTTCG AGCTCGTGAT GCGCGTGCAT ACGCACCTGG CCGAGCTGTT CGCGACGCAT
GCGTCGAAGC TCGTGCGGGC CGGGTTCATC AACGGGCTGC CGGGCTTCGT CACGCTGGAA
GCCGACGGCG AGCTGCAGAC GACTGCGCTC GAAATCGACG ACGGCAAGAT CGTCGCGATC
TATGTCGTGC GCAATCCTGA CAAATTGAAG CATCTGCATT GA
 
Protein sequence
MPNLDPASAS ADDRADAAAS FDPLRRTLIR VAYRMLGSVA DAEDMVQEAF IRWMDVDRTE 
VRVPEAFLRR MVMRMCLDQL KSARRQRETY IGPWLPEPVV EEDEQDDVTL PLLLALERLS
PLERAAFLLH DVFGLEFDEV ATTIQRDPAA CRQLAARART HVREARPRFH VEKQRGIELA
EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRTAAAKPV FGFELVMRVH THLAELFATH
ASKLVRAGFI NGLPGFVTLE ADGELQTTAL EIDDGKIVAI YVVRNPDKLK HLH