Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0038 |
Symbol | |
ID | 6121721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 52220 |
End bp | 53101 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641636585 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_001763340 |
Protein GI | 170731393 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAACC TCGACCCGGC CAGCGCCAGC GCCGACGATC GGGCCGACGC GGCGGCGAGC TTCGATCCGC TGCGTCGCAC ACTGATCCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG GATGCCGAGG ACATGGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA CCGTACCGAG GTGCGCGTGC CCGAGGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGACCAGTTG AAGTCCGCGC GGCGCCAGCG CGAGACCTAT ATCGGCCCGT GGCTGCCCGA GCCGGTCGTC GAGGAAGACG AACAGGACGA CGTCACGCTG CCGCTGCTGC TCGCGCTCGA ACGGCTCTCG CCGCTCGAAC GCGCGGCGTT CCTGCTGCAC GACGTGTTCG GCCTCGAATT CGACGAAGTG GCCACGACGA TCCAGCGCGA CCCGGCCGCC TGCCGGCAAC TCGCCGCGCG GGCCCGCACG CACGTGCGCG AGGCGCGACC GCGTTTTCAT GTCGAGAAGC AGCGCGGGAT CGAACTGGCC GAAGCGTTCT TCGCGGCGTC ACGCAGCGGC GACATGCGCG CGCTCGGCGC GATGCTTGCG GAGGACGTGA GCCTGCATTC CGACGGCGGC GGCAAACGTA CGGCTGCGGC CAAGCCGGTG TTCGGCTTCG AGCTCGTGAT GCGCGTGCAT ACGCACCTGG CCGAGCTGTT CGCGACGCAT GCGTCGAAGC TCGTGCGGGC CGGGTTCATC AACGGGCTGC CGGGCTTCGT CACGCTGGAA GCCGACGGCG AGCTGCAGAC GACTGCGCTC GAAATCGACG ACGGCAAGAT CGTCGCGATC TATGTCGTGC GCAATCCTGA CAAATTGAAG CATCTGCATT GA
|
Protein sequence | MPNLDPASAS ADDRADAAAS FDPLRRTLIR VAYRMLGSVA DAEDMVQEAF IRWMDVDRTE VRVPEAFLRR MVMRMCLDQL KSARRQRETY IGPWLPEPVV EEDEQDDVTL PLLLALERLS PLERAAFLLH DVFGLEFDEV ATTIQRDPAA CRQLAARART HVREARPRFH VEKQRGIELA EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRTAAAKPV FGFELVMRVH THLAELFATH ASKLVRAGFI NGLPGFVTLE ADGELQTTAL EIDDGKIVAI YVVRNPDKLK HLH
|
| |