| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0033 |
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| Symbol | |
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| ID | 6121716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 47960 |
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| End bp | 48718 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641636579 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001763335 |
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| Protein GI | 170731388 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00163217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC CTCCGAACGA ACATGACCTT CAGGCCTATG TCGACGGCCA GCTCGACGAC
GATGCGCGTG CCGCGGTCGA GCGTTATCTC GCGCTGCATC CGGCACGCGC GGAACAGGTG
AAGCAATGGC AGCAGGATGC GCAGCGGTTG CGGGCCGCGC TGGAGAGCGT GCGGATGCCG
GCCGATAACC CCGCGCTGGA TCCGGCCGCG ATTCGCGGCC GGCGGGCCGA GCGCGCGCGG
ATGCGGTTCG CGATGGCGGC TTCGTTCGTG TTCTGCGTCG GGCTCGGGAC GTTCGGCGGA
TGGCAGGCGC GCGGGTGGAA CGCGCCGCCG CCCATCGCGC CGATGAGCGA TGCGGTCAAG
GCTTACCAGA TGATGGTGGT CGATCGGACG GCCAAGGTCG ATTACCGGCC GACCGGTGCG
GGTGATTTGC AAGGGTGGCT CACCAAAGGC GTGGGCGCAT CGGCGAAGCT GCCGGATTTG
AGCGCGGCGG GGTTCAGGCC GGTTGGTGGG CGGTTGTTCA CGACCGACAG CGGCGCGACT
GCCGCGATGG TGCTCTATGA GGATGACGCG GGACGGACGC TGAGCTTCTA TCTCCGGCCG
GCGGAATCGA AACATCGGCT GTTGCCGAAC GGGCAACGCG TGGATGGCGC ACTACTGGCG
CGGTATGGAT CGGTGAATGG GCTCAACTAT GCGGTGGTCG GGCCGGCCGG GAGTCTTGGG
GAAAAGGCGG TCGTGCAGGC GCTCGATCAG CAGACTTGA
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| Protein sequence | MNTPPNEHDL QAYVDGQLDD DARAAVERYL ALHPARAEQV KQWQQDAQRL RAALESVRMP
ADNPALDPAA IRGRRAERAR MRFAMAASFV FCVGLGTFGG WQARGWNAPP PIAPMSDAVK
AYQMMVVDRT AKVDYRPTGA GDLQGWLTKG VGASAKLPDL SAAGFRPVGG RLFTTDSGAT
AAMVLYEDDA GRTLSFYLRP AESKHRLLPN GQRVDGALLA RYGSVNGLNY AVVGPAGSLG
EKAVVQALDQ QT
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