| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0018 |
|---|
| Symbol | |
|---|
| ID | 6121702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 26290 |
|---|
| End bp | 27993 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641636562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763321 |
|---|
| Protein GI | 170731374 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCA AACCAATCCA TAACGCAGGT TGGCGCTCGC GGGGAATCGC CCTGTTCGCA
GGGCGGTTCC TTGTACGACC TATGGCATGC TCGGATGAAA GCTTCCTTGG CTACCGCCTG
CGGGTCGCAT TCGCCAACGG ACTTTCCAAC CCTGGCTGGT TAGACTGTCG GGATTGCAGC
CTACCCAAAG CTCACGGTAT CGCCCGCTGG TGTCCACATT GCTTGGCCGA CGCCGGATGC
TATTGGCGTG AGGACTGGTA CTCCGGGCCG GCAGCGTGCT TGACGCATCG CTGCTGGCTG
ACCTCGGTAT GCGCCGCGTG CCGGCGAACA TTGCGCTGGA AGCAGGTTCG CTTCGCCATT
TGCACATGCG GCGCACCACT GCGAGAAGCG GCCGTCGACA AATTTTCGGC CGAAGTACTG
AAGCTGATTG GCGAACAAAT TACTTCGAGT GCTGCCTCGT TGTCTGTTGG GGAACGCTGG
AACCTCGCCC GTTTCCTTGG GGCGCTCTCG CAATTTGGGC TGCAGGGCAA GCCATTGAAG
AGGGCGTCGC GTCGAAAAGA GAATATCGAA CAACTCTTGG TGACAGCCGG CGCATCACTA
ATCGTCGATC GATCCGCCAG TTTCGAATTG CTTGATCGCC TTCGTGCGCC ACAGGCGGAT
ATGAACAACG TCCCCTTGTT CTCGGAAGTC TTTCCGCACT TGCTCACCAT GCTACGCAAG
CAATTGAGTA AGGAAGAACA TCGGTGGATG CTGAACATGC TGGACGCATA CATTAGCAAT
TCATCTCGTC AAGGGTCGGC GGTGCTCTGG GAACGAAGGA GCGATGCAAG GGGGACGAAC
ACGGAGTTGC GCAGTCGGCA GAAGACACGA AACTCGGCCG TTACCAATAT GCTCGCGCAG
ACGGGTGAAA TCGTACCAGT CCGGCGAACC CCGGCTGGAC GGCAAAAGTT TGCAATCAGC
GCCGATAACC TGAAACGTCT TCGGAACACG CAGCGTTCGC TGGTCCCGCT AAAGACAGCG
GTCCGATACG CCGGGATGTC TACCAGACGC ATCCAAGCAC TGGCGAAGGC GGGCCTACTT
GCTTCACACG AGACACGCAT CGACACGAGA TCTGTCGATC GATTCCTCAA CGACATCACG
GCAGTGTGTG CCCGTGACGG ACCGGCAATT GAGGATCCGA TCAGCCTAGC CGAGGCCTTA
CGTCTGTATG TGCCTGTTGA AGCGTCTGCA GCATTCTTCA ATCACCTCGC GAACGGTGCT
ATGCGCCTTG CCGTCGACAG GGGCAAGCAA CCGACGTTGC GGAATATTTT TGCCGACCGC
GACGACGTGA TTTCCGCCGC GCAGATACCG GTCGAATCGG ATTCCCCGAT ATCAATTGTT
GAAGCAGCTC GTCGACTCGG CGTCAAACAG GAAGTGATGT ACCACCTGAT CAACATAGGG
CTAGTCAAGA CCCGAACGGC CAAGCTGCGC CGCAGGGCAG CACAAGCTGT CGATGTTGAT
GAGCTGAAGA AATTTGCCGA ACAATTCCAG CCACTGCGCA CAGTGGCAAG TGCGATCGGA
ATCTCCGCTC GCGAGGCACC CGGTTGGGCT CGGCAACATG GTATTGAGAT CGTCACCGGG
CCATCGGTCG ATGGCGGACG ACAGTACTGG ATCCGCACGC AGACCACCAC AGGTAGTTCT
CGCAGTGTCG GTAGCGAAGC TTGA
|
|---|
| Protein sequence | MNLKPIHNAG WRSRGIALFA GRFLVRPMAC SDESFLGYRL RVAFANGLSN PGWLDCRDCS
LPKAHGIARW CPHCLADAGC YWREDWYSGP AACLTHRCWL TSVCAACRRT LRWKQVRFAI
CTCGAPLREA AVDKFSAEVL KLIGEQITSS AASLSVGERW NLARFLGALS QFGLQGKPLK
RASRRKENIE QLLVTAGASL IVDRSASFEL LDRLRAPQAD MNNVPLFSEV FPHLLTMLRK
QLSKEEHRWM LNMLDAYISN SSRQGSAVLW ERRSDARGTN TELRSRQKTR NSAVTNMLAQ
TGEIVPVRRT PAGRQKFAIS ADNLKRLRNT QRSLVPLKTA VRYAGMSTRR IQALAKAGLL
ASHETRIDTR SVDRFLNDIT AVCARDGPAI EDPISLAEAL RLYVPVEASA AFFNHLANGA
MRLAVDRGKQ PTLRNIFADR DDVISAAQIP VESDSPISIV EAARRLGVKQ EVMYHLINIG
LVKTRTAKLR RRAAQAVDVD ELKKFAEQFQ PLRTVASAIG ISAREAPGWA RQHGIEIVTG
PSVDGGRQYW IRTQTTTGSS RSVGSEA
|
|---|
| |