| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0005 |
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| Symbol | |
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| ID | 6121689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 7418 |
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| End bp | 9991 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641636549 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001763308 |
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| Protein GI | 170731361 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACA CAAGCGTCGC AGGTGCACGG CCTCTCAGCC GGTTTCTAAA ATTGGCCGTC
ATGGCTGGGA TCGAGAGCGC CATTCGGATT CACATCGACC GAGGCGATGA TCTCAACGCC
CGCGACCGAA ACGGTTTGAC CCCTCTAATG TTGTCGGCAG CTCGAAACAA GCCCGCAATC
TGCAAATTGC TGCTCGATGC GGGAGCTGAC GACGGCCTAC TCGATCCCTC TGGAAAAACG
GCCCTTGCCA TTGCGGTTGC CGCAGGCGCA TACGACGCCG CGGCTGTCCT CGAATCAGCC
CAAGCCCCGA TCGAAACTTT TGGCGACCCA GCCATTAGCG TGCCCACATC CTCTAATGGA
CCCATCGAAC ACTTCGACGC CCAAGCCTCG GAACACCCCT CGTATCCGAC CAGCGCAAGC
GTGACTGAAG CCGACATGGC ACGGCCTCCT GCCCCAGCCA TAGTCGATGA CGCGACCGAA
CCAGAGAACC CGCCAGACTT TGACTTGTCC GGCTGGGAGC CCGAGGAAGA CCGGCCACCA
CCCGATGCGG ATTTGTCGGT CGCCCAAGCC GCGAGCGCAA TTCAGGCCGC CATTACAGAA
TACGAAGGCG TCGACTCTTC AGTTGACTGG GACGATATCG ACGCGTACCT GCCGGAAAGA
TCGCAGCCGT TGGCGCGCAC AGACGACGCC GAAGTTCTGG GACGGCTCCG TCTGCTAATG
CTTCGAGCCG TCCGCGAGGG CAGCGTGCCG CAGATGTGGG TCGAGGCGCT GTCGGTCAAC
GATGACCGGT CCCCGAACCC TGACGTCGAA GCGCAGTTGA GCATGATAAT CAACGACCTT
GGCGCTGAGG TCGATGAGCG ATTCGAGTAC GCCAGTGTCA GCGCCACCGA AAACTTCGAG
GTCTACGTCA AACCAGAGGA ATCGCCGGAC GAAGAAGAGA TCGTGGCCAA TGCCTTGACC
TCCATCGACA GCCTCGCATC CAATCGCACA GAGCCTCTGT ACATTTACCA AAAGGAATTC
CAGCGGAAAA GGCTCATTTC CGCGGACGAA GAAGTCGCGC TGAGCCGAGC CATGGAAAGC
GAGTTGGAAC GAGCGCTCGA CGCCTTGGCC GCTTGGCCAC GCGGTATCGA CCTCACATTG
GCTGCTGGAC ACGTGGTCAG GACAGGACAA CAACCTTTGG CATGGTTGTC GCTCGGCCCC
GCCGACACCC AGTCAGAGCT TGAGCCCACT TCCGAAGGCG AAAACGATGC CGGCGCGGCC
ACATCGGACC CGACTGGCGA AACAGCGGAG CACGATAGCG ACCTCCAATT CGAGATCTGC
CCGCGTGGCG ATCAAGCCTC GGACTTCATG GATGCGCTGG ACCGGCTCGC GGGCCTTCCA
GTCGGCTCTG CTCAGCAGGG AGCGGGATGG CAAGCCATCC GTGAAACACT GTCGGCGCTT
CGACTGAATC GGCGCTTCCT CTTGGAACTG GCCGATCTCG CAGACGGCGG CGACTCCGGC
TTGGCCAGCC AATACGCGAA CGCCATGAAG GCCTACCAGC TCGCCCGCGA ACGAATGGCC
GTCGCCAACC TGAAGCTCGT TTTCCATCTC GCTAAAAAGT ACCGATACAG CGGCGAACCA
TTGGACGACT TGGCACAAGA AGGAAACATC GGCCTGCTGA AAGCCGTCGA GCGTTTCGAT
TGGCGCCGAG GGTTCAAGTT CTCCACCTAC GCCACTTGGT GGATACGGCA GCAGATTGGA
CGGCACCTCG CCGACAAATG CAGGACGGTT CGCGTTCCGG TCCATGTCCA TGAAAAGGCC
CAGCGCCTTT CCCGAGAGAC TCAGGCGCTT GAATCGGAGA CAGGGCGCGC CCCTGAACTC
CACGAGATCG CGGCTCGTTT GAACATGGCC GTCCAGAAGG TGGCCGAGCT TCAACGCCTC
GCTCCTGAGC CATTGCCGAT CCATGAACTG CCCATCGACG AGCTGATAGC CGTTGAGGTC
CGATCAGATT TCGTCTCGCC AGATCCCATG GACATCGTGT CCAAGTCCGA ATTACTTGAG
ACAATCGACA AGCTGCTGTC CACACTAAAG CCCAAGGAAG AACAGACTCT TCGTCTGCGC
TTCGGCATCG GCGTCGAAGA GGCGTTGACG CTCGAAGAAA TTGGCTGCCA ATACGGAGTC
ACAAGAGAGC GCGTTCGCCA GATCGAGGTC GCCGCGCTCC GAAACCTGAA GCACCCACGT
CGAATGGATG CGTTCGCGTG CGCAGTCTTC GGCGGCCCTC TTTCCACAAA GTGCAAAGAG
GAAGAAGACA GCGTCGAGCA ACCATCAAAC AACCAAACGA TGCGACAGCC TGCCGCGACC
AAGACGGCCC CCTCGAGCCT GAGCGCCCAA CCGCCCAGAC GATCGCCTAG CGTCGACAGG
CTCCTGTCAG AAGTCGCAGA CTTGGGCATT CCCATCGACG ACGACCGCAA CGGGCCTTCG
GGGAGCATAT GGGTTAACCT CACTAATGCA CCGGATAGCC GTTACCGCAG ATTAGTCCGC
AAACTGCTTG CTCTGGGATT CGAATTCTGG CCAGGGAAGG GCTATTGGAG ATGA
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| Protein sequence | MNDTSVAGAR PLSRFLKLAV MAGIESAIRI HIDRGDDLNA RDRNGLTPLM LSAARNKPAI
CKLLLDAGAD DGLLDPSGKT ALAIAVAAGA YDAAAVLESA QAPIETFGDP AISVPTSSNG
PIEHFDAQAS EHPSYPTSAS VTEADMARPP APAIVDDATE PENPPDFDLS GWEPEEDRPP
PDADLSVAQA ASAIQAAITE YEGVDSSVDW DDIDAYLPER SQPLARTDDA EVLGRLRLLM
LRAVREGSVP QMWVEALSVN DDRSPNPDVE AQLSMIINDL GAEVDERFEY ASVSATENFE
VYVKPEESPD EEEIVANALT SIDSLASNRT EPLYIYQKEF QRKRLISADE EVALSRAMES
ELERALDALA AWPRGIDLTL AAGHVVRTGQ QPLAWLSLGP ADTQSELEPT SEGENDAGAA
TSDPTGETAE HDSDLQFEIC PRGDQASDFM DALDRLAGLP VGSAQQGAGW QAIRETLSAL
RLNRRFLLEL ADLADGGDSG LASQYANAMK AYQLARERMA VANLKLVFHL AKKYRYSGEP
LDDLAQEGNI GLLKAVERFD WRRGFKFSTY ATWWIRQQIG RHLADKCRTV RVPVHVHEKA
QRLSRETQAL ESETGRAPEL HEIAARLNMA VQKVAELQRL APEPLPIHEL PIDELIAVEV
RSDFVSPDPM DIVSKSELLE TIDKLLSTLK PKEEQTLRLR FGIGVEEALT LEEIGCQYGV
TRERVRQIEV AALRNLKHPR RMDAFACAVF GGPLSTKCKE EEDSVEQPSN NQTMRQPAAT
KTAPSSLSAQ PPRRSPSVDR LLSEVADLGI PIDDDRNGPS GSIWVNLTNA PDSRYRRLVR
KLLALGFEFW PGKGYWR
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