Gene Bcenmc03_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0001 
SymboldnaA 
ID6124945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp303 
End bp1880 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content66% 
IMG OID641636545 
Productchromosomal replication initiation protein 
Protein accessionYP_001763304 
Protein GI170731357 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.54964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT TCTGGCAACA CTGTTCCGCA CTGCTGGAGC GCGAGCTGAC GCCCCAGCAG 
TACGTGACGT GGATCAAACC CTTGGCCCCG GTGGCCTTCG ATGCGTCGGC GAACACGCTG
TCCATCGCCG CGCCGAACCG CTTCAAGTTG GACTGGGTCA AGAGCCAGTT TTCGGGCCGG
ATCTCCGATC TGGCCCGAGA ATTCTGGAAC ACGCCGATCG AAGTCCAGTT CGTCCTCGAT
CCGAAGGCCG GCATGCGCAG CGCCGCCGCA GGCGCCGCAC CGGCCGCGCC ACGTGCGCCG
CTGACCCCGA ACGGCCCGGC CGCGACGGTC GCCGCGATCG CCGCCAACCT GACCGCGAAT
GCCGCCGCCG CGCCCAGCGC GCCGGCCGAC GTGCCGATGA CGCCGTCGGC CGCCGCCGCA
CACCACCTGA ACGCCGACGA CGCCGACATC GACCTGCCGA GCCTGCCCGC GCACGAAGCC
GCGGCCGGCC GCCGCACGTG GCGTCCGGGC CCGGGCGCCG CGCCCGCGAA CGGCGGCGAA
GCCGATTCGA TGTACGAACG TTCGAAGCTG AATCCGGTGC TCACGTTCGA CAACTTCGTG
ACCGGCAAGG CGAACCAGCT CGCGCGCGCC GCCGCGATCC AGGTCGCGGA CAACCCCGGC
ATCTCGTACA ACCCGCTGTT CCTGTACGGC GGCGTCGGCC TCGGCAAGAC CCACCTGATC
CACGCGATCG GCAACCAGCT GCTGCTCGAC AAGGCCGGCG CGCGCATCCG CTACATCCAC
GCCGAGCAAT ACGTGTCGGA CGTGGTCAAG GCGTATCAGC GCAAGGCGTT CGACGACTTC
AAGCGCTACT ACCATTCGCT CGACCTGCTG CTGATCGACG ATATCCAGTT CTTCTCCGGC
AAGTCGCGCA CGCAAGAGGA ATTCTTCTAC GCGTTCGAGG CGCTGGTCGC GAACAAGGCG
CAGGTGATCA TCACCAGCGA CACGTATCCG AAGGAAATCT CCGGCATCGA CGATCGCCTG
ATCTCGCGCT TCGACTCGGG CCTCACCGTC GCGATCGAAC CGCCCGAGCT GGAAATGCGC
GTCGCGATCC TGATGCGCAA GGCGCAGTCG GAAGGCGTGA ACCTGTCGGA AGACGTCGCG
TTCTTCGTCG CGAAGCACCT GCGCTCGAAC GTGCGCGAAC TCGAAGGCGC GCTGCGCAAG
ATCCTCGCGT ATTCGAAGTT CCACGGCCGC GAGATCTCGA TCGAGCTGAC CAAGGAAGCG
CTGAAGGACC TGCTGACCGT GCAGAACCGG CAGATTTCGG TCGAGAACAT CCAGAAGACC
GTCGCCGACT TCTACAACAT CAAGGTCGCG GACATGTACT CGAAGAAGCG CCCCGCGAAC
ATCGCGCGGC CGCGGCAGAT TGCGATGTAC CTGGCGAAGG AACTCACGCA GAAGAGCCTG
CCGGAAATCG GCGAGCTGTT CGGCGGGCGC GATCACACCA CCGTGCTGCA CGCGGTGCGC
AAGATCGCCG ACGAGCGCAG CAAGGACGCG CAGCTCAACC ACGAGCTGCA CGTGCTGGAA
CAGACGCTGA AGGGCTGA
 
Protein sequence
MNDFWQHCSA LLERELTPQQ YVTWIKPLAP VAFDASANTL SIAAPNRFKL DWVKSQFSGR 
ISDLAREFWN TPIEVQFVLD PKAGMRSAAA GAAPAAPRAP LTPNGPAATV AAIAANLTAN
AAAAPSAPAD VPMTPSAAAA HHLNADDADI DLPSLPAHEA AAGRRTWRPG PGAAPANGGE
ADSMYERSKL NPVLTFDNFV TGKANQLARA AAIQVADNPG ISYNPLFLYG GVGLGKTHLI
HAIGNQLLLD KAGARIRYIH AEQYVSDVVK AYQRKAFDDF KRYYHSLDLL LIDDIQFFSG
KSRTQEEFFY AFEALVANKA QVIITSDTYP KEISGIDDRL ISRFDSGLTV AIEPPELEMR
VAILMRKAQS EGVNLSEDVA FFVAKHLRSN VRELEGALRK ILAYSKFHGR EISIELTKEA
LKDLLTVQNR QISVENIQKT VADFYNIKVA DMYSKKRPAN IARPRQIAMY LAKELTQKSL
PEIGELFGGR DHTTVLHAVR KIADERSKDA QLNHELHVLE QTLKG