| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4929 |
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| Symbol | |
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| ID | 6119310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5932977 |
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| End bp | 5934611 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636514 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001763273 |
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| Protein GI | 170729247 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000771873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000001353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGAATCTC AACGCAATAT ATTGCTTATC GGTCTGCTTT TTGTCAGCTT TTTGCTTTGG
CAACAGTGGC AGACAGATCA AGCCCCACAA CCAGTAGCGA CTCAATCTTC ATCGGTTGTC
ACTGCTTCGT CAGCTTCTGA TTCTCACAGC TCTGATGTAC CCGATGCAGA CTCAGCACTT
CCTGCTGCCG TTGTCGCATC GAAAGATCTC ATCACAGTGA ACACTGATCA ATTAATCATT
AAGATTAATC CGGTTGGTGG TGATATCGTT TATTCAGCCC TAGTTGAACA TAAACTTGAG
CTAGAAAATG ACGAGCCATT TGTACTACTA GAGCAAACTA ATGATATTAA CTATATTGCT
CAGAGTGGAC TTATCGGCCG TGACGGTATC GACAGCAGTG TTAAGGGCCG CGCGCACTTC
GACAGTGCTT CACGCAACTA CAGCTTAGCT GCAGGTCAAG ACACTCTAGA GGTGCCACTG
ACTTATGTTG CTGAAAATGG TGCAACTTAC ACTAAGATGT TTATCTTCCA TCGTGGCAAG
TTCGACGTAG ATGTCGATTA TGTCATCGAT AACAAGACAG ATAAGCAGCT GCAAGTTCAG
ATGTACGGTC AGATTAAACA CAGCATCAAG AAAAGCGAAA GCAGCATGAT GATGCCTACC
TATCGCGGCG CGGCTTTCTC GACTCAAGAC ACACGTTACG AGAAATACAG CTTCGAAGAT
ATGGCTGATA AAAACCTAGA CAAGAAAACG TTAGGTGGCT GGGCTGCTAT GCTACAGCAC
TACTTCGTTT CTGCTTGGGT ACCACCAGCA AACGATCAAA ACATCATCTT CTCTAGCATC
AGTGCTGGCG GTCAGGCAAA CATAGGTTTC CGTGGCGCCA TCTTTGATGT AGCACCTGGG
GCGACTCAAG AGATCACCTC TCAGTTCTAC GTTGGTCCTA AAGATCAGGC AGCACTGTCG
GCTATCTCTC CAACCCTTAA CTTGGTTGTT GATTATGGCT TCCTATGGTG GCTAGCAGTT
CCAATCTACA AACTATTGAT GTTCTTCCAA TCAATTGTAG GTAACTGGGG TGCGGCAATT
ATTCTTATTA CCCTAACGGT ACGTGGTCTG TTATACCCAC TGACTAAAGC TCAATACACC
TCTATGGCTA AGATGCGTAA TCTACAGCCA AAGCTTGCTG AGATGAAAGA GCGTTTCGGT
GATGACCGTC AGAAGATGGG TCAAGCCATG ATGGAGCTGT ACAAGAAAGA GAAAGTTAAC
CCTATGGGTG GCTGTCTACC TATCTTGTTA CAGATGCCAA TCTTCATCGC CCTATACTGG
GTACTGCTTG AAAGTGTTGA ACTGCGTCAT GCACCGTTCA TGCTTTGGAT CACCGACCTT
TCGGTACAAG ATCCTTACTA CGTGATGCCA ATCTTAATGG GTGTCTCTAT GTTTGTGATG
CAGAAGATGC AGCCTATGGC ACCGACAATG GATCCAATGC AAGTTAAGAT GATGCAGTGG
ATGCCAGTGG TATTTACCGT ATTCTTCCTA TGGTTCCCTG CAGGTCTAGT ACTTTACTGG
TTAGTAGGTA ACTTAGTTGC AATCGCGCAG CAGAAGTACA TCTACGCAGG TTTGGAGAAA
AAAGGGTTAA AATAA
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| Protein sequence | MESQRNILLI GLLFVSFLLW QQWQTDQAPQ PVATQSSSVV TASSASDSHS SDVPDADSAL
PAAVVASKDL ITVNTDQLII KINPVGGDIV YSALVEHKLE LENDEPFVLL EQTNDINYIA
QSGLIGRDGI DSSVKGRAHF DSASRNYSLA AGQDTLEVPL TYVAENGATY TKMFIFHRGK
FDVDVDYVID NKTDKQLQVQ MYGQIKHSIK KSESSMMMPT YRGAAFSTQD TRYEKYSFED
MADKNLDKKT LGGWAAMLQH YFVSAWVPPA NDQNIIFSSI SAGGQANIGF RGAIFDVAPG
ATQEITSQFY VGPKDQAALS AISPTLNLVV DYGFLWWLAV PIYKLLMFFQ SIVGNWGAAI
ILITLTVRGL LYPLTKAQYT SMAKMRNLQP KLAEMKERFG DDRQKMGQAM MELYKKEKVN
PMGGCLPILL QMPIFIALYW VLLESVELRH APFMLWITDL SVQDPYYVMP ILMGVSMFVM
QKMQPMAPTM DPMQVKMMQW MPVVFTVFFL WFPAGLVLYW LVGNLVAIAQ QKYIYAGLEK
KGLK
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