Gene Swoo_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4920 
Symbol 
ID6119301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5921125 
End bp5921685 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content31% 
IMG OID641636505 
Producthypothetical protein 
Protein accessionYP_001763264 
Protein GI170729238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00344058 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTA GTAATATTTT TCAAGTGTTT ACGGATAATG CTATCTTACA CTTATACTTA 
GAACTGTCTG ATAGGGGTGG GTTCTCCACT CATGAACATC GGAATCAGAT TTTAGTACGG
TTTATTAAAA AATCCTTAAA AAATCAAAAG TATAAGATTA TTAGAAAAGA ACTGAAGCGT
TTGTTACATG TAAGAGGGAA TACCTCCATT TCTTTAGAGA GTAGGCTTTG GGACTTTAAA
ATTGTTAGTG ATAAAAGTAA GTCAGACTTA AGGCATTTGT ATGATCTTTT AGAGTATCTA
AACCTAGATT TAGGTTTAGA GTCTCGGTTT TTTATCGATG AGCCCGATGA GAAATTTATC
AGTATGAAAC AATATGAAGT AGAAAACTGT TTCAATAAGA AAGGAGAACA ATTAACCCCG
ATTTCAATGA CTATCGAAAC TGCAAAGCTG GATAAAGTGA TTGACTATAT AAGTCAAAAA
TCACCTTTTA CAGTCGAAAT TGCTTCTAGT TCCAGTAAGT GCTTTTTTAT AGTCATATAT
CTGTTTTTAA ATAATAAATA A
 
Protein sequence
MIISNIFQVF TDNAILHLYL ELSDRGGFST HEHRNQILVR FIKKSLKNQK YKIIRKELKR 
LLHVRGNTSI SLESRLWDFK IVSDKSKSDL RHLYDLLEYL NLDLGLESRF FIDEPDEKFI
SMKQYEVENC FNKKGEQLTP ISMTIETAKL DKVIDYISQK SPFTVEIASS SSKCFFIVIY
LFLNNK