| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4909 |
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| Symbol | |
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| ID | 6119290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5901992 |
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| End bp | 5903884 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636494 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001763253 |
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| Protein GI | 170729227 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.657884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.127151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTTC ATGAAAGGTT CGATGTCATT GTTATCGGTG GTGGTCATGC TGGTACTGAA
GCAGCATTAG CCGCAGCAAG AATGGGTTCT AAAACTCTAC TGCTGACGCA TAACATCGAC
ACCTTAGGAC AGATGTCTTG CAATCCAGCT ATTGGCGGGA TCGGTAAGGG ACACTTGGTA
AAAGAGATTG ATGCCTTAGG CGGTGCAATG GCAATTGCTA CTGACTATGC TGGTATTCAA
TTCAGAACCC TTAACTCAAG CAAGGGACCT GCGGTAAGAG CCACACGTGC TCAAGCAGAT
AGAGCGCTAT ATCGAGCTAA AATCCAAGAG ATCCTACAAA ATCAGCCTAA CCTTAGATTA
TTTCAGCAAG CCGTAGATGA CTTGATTGTT GAGAACGGAC GAGTGACAGG TGTTGTGACT
CAGATGGGAT TAGCATTTGA AGCACCAGCA GTGGTATTGA CCGCGGGGAC TTTCCTCAGT
GGTAAAATCC ATATCGGTAT GCAGAACTAC AGTGGTGGAC GAGCGGGTGA TCCACCATCG
ATCGCACTGG CCGATCGTCT ACGTGAACTG CCGATCCGTA TTGGTCGATT AAAAACAGGT
ACTCCACCTA GAATCGATGC CAATACCATA AATTTTGACC TGATGACCGA GCAGAAAGGC
GATACGCCTC TACCTGTGAT GTCATTTATC GGTGATGTGA GTCAACATCC TAAGCAGATC
TCATGCTTTG TGACTCATAC CAATGAGAAA ACTCACGATA TTATTCGTGG TGGTCTCGAT
AGAAGTCCTA TGTATTCAGG AGTGATTGAA GGTGTTGGCC CACGCTACTG CCCCTCTATC
GAAGATAAGA TCCACCGTTT TGCCGATAAG TCATCTCATC AGATCTTTAT CGAACCTGAA
GGCTTAAACA CTAATGAGAT CTACCCTAAT GGTATCTCTA CGAGTTTACC GTTCGATGTA
CAGTTAAACC TTGTTCGCTC AATCAAGGGG ATGGAAAACG CTGAGATTAT CCGCCCAGGT
TATGCGATCG AGTATGATTA CTTTGATCCA AGGGATCTGA AAAACTCACT TGAGACCAAA
TCTATCGATG GCCTCTTCTT CGCTGGACAG ATTAACGGTA CGACCGGTTA TGAAGAAGCG
GGAGCACAAG GACTTCTAGC GGGGATGAAT GCATCACTGC AGGTTCAAGG CAAAGAGATC
TGGTGCCCAC GCCGTGATGA AGCCTATCTT GGGGTTTTGG TTGACGACCT TTCGACGCTG
GGAACCAAAG AGCCTTACCG TATGTTCACT AGCCGTGCGG AATACCGTTT ACTGCTTCGC
GAAGATAACG CCGATCTACG TCTAACTGAA AAAGGACGTG AAATTGGCTT AGTCGATGAT
GAGCGTTGGG CTAAATTTAG CGAAAAGCGT GAATCGATAG AACTTGAACT GCAACGTCTT
CGTAGTCAAT GGGTTCACCC TAATTCACCT TTGATTGATG TATTAAACCC TGAACTGAAT
ACACCTATTT CACGTGAAGC TTCTTTTGAA GATCTGCTGC GTCGTCCTGA GATGGATTAC
CCTAAGTTGA TGTCATTAGA AGGCTTTGGT CCTGGACTTG ATGATCCACG TGCCGCTGAG
CAGGTGCAGA TCCAGGTTAA GTATTCAGGT TATATCCAAC GTCAACAGGA TGAGATCGAT
AAAGCGATTC GCCATGAGAC CACAGGCTTA CCTCTAGATC TTGATTATCA AGAGGTACCA
GGTTTGTCGA ACGAGGTGAT CGCTAAGCTT AACGACCATA AACCTGAAAC CATAGGTCAG
GCGTCGAGAA TCTCTGGTAT GACACCAGCA GCTATCTCTA TTTTGTTAGT ACACCTGAAA
CGTCGCGGCC TATTACGTAA AAAAGCTTCA TAA
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| Protein sequence | MHFHERFDVI VIGGGHAGTE AALAAARMGS KTLLLTHNID TLGQMSCNPA IGGIGKGHLV
KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRAKIQE ILQNQPNLRL
FQQAVDDLIV ENGRVTGVVT QMGLAFEAPA VVLTAGTFLS GKIHIGMQNY SGGRAGDPPS
IALADRLREL PIRIGRLKTG TPPRIDANTI NFDLMTEQKG DTPLPVMSFI GDVSQHPKQI
SCFVTHTNEK THDIIRGGLD RSPMYSGVIE GVGPRYCPSI EDKIHRFADK SSHQIFIEPE
GLNTNEIYPN GISTSLPFDV QLNLVRSIKG MENAEIIRPG YAIEYDYFDP RDLKNSLETK
SIDGLFFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKEI WCPRRDEAYL GVLVDDLSTL
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KGREIGLVDD ERWAKFSEKR ESIELELQRL
RSQWVHPNSP LIDVLNPELN TPISREASFE DLLRRPEMDY PKLMSLEGFG PGLDDPRAAE
QVQIQVKYSG YIQRQQDEID KAIRHETTGL PLDLDYQEVP GLSNEVIAKL NDHKPETIGQ
ASRISGMTPA AISILLVHLK RRGLLRKKAS
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