| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4900 |
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| Symbol | |
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| ID | 6119281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5895125 |
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| End bp | 5896666 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636485 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001763244 |
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| Protein GI | 170729218 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0995639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.22979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAAC AGCGGATCGA GCAGTTCGAA
GTCGTTAGTG AAGCTCGCAA CGAAGGTACT ATCGTTGCAG TTAGTGACGG CATCATCCGC
ATCCACGGCC TAGCCGACGT GATGCAAGGT GAAATGATCG AGCTGCCTGG TAACCGTTTC
GCAATCGCGT TGAACTTAGA ACGTGATTCT GTCGGTGCCG TAGTTATGGG CCCTTATGCC
TCTTTGGCTG AAGGCGACAA AGTAAAAACA ACTGGTCGTA TTTTGGAAGT CCCAGTTGGC
CGTGGTCTTT TAGGTCGCGT AGTCAACACA TTGGGTGAGC CAATCGACGG AAAAGGACCT
ATCGATAACG ATGGTTTCTC TCCTGTTGAA ATGATCGCAC CAGGTGTTAT TGAACGTAAG
TCAGTAGATC AACCAGTACA AACTGGTTAT AAAGCCGTTG ACTCTATGAT CCCTATCGGT
CGTGGACAGC GTGAGTTGAT CATTGGTGAC CGTCAGATCG GTAAAACCGC TCTAGCGATC
GATGCCATCA TCAACCAAAA AGATACTGGC ATTAAGTGTG TATACGTAGC TGTAGGCCAG
AAGGCTTCTA CAATTGCTAA CGTGGTACGC AAGCTAGAAG AACATGGCGC TTTGGCGAAC
ACCATTGTTG TTGTTGCTAC AGCTTCTGAA GCTGCTGCTC TACAATATTT GGCTCCATAC
TCTGGTTGTT CAATGGGTGA GTACTTCCGC GACCGCGGTG AAGATTCACT GATTGTCTAT
GATGATCTTT CTAAGCAAGC AGTTGCTTAC CGTCAGATCT CATTGCTACT TAAGCGTCCA
CCAGGACGTG AAGCATACCC AGGTGATGTA TTCTATCTTC ACTCTCGTCT GTTAGAGCGT
GCTTCACGTG TTAACGCCGA GTATGTTGAG AAGTTCACTA AAGGTGAAGT GAAAGGCCAA
ACTGGTTCTT TGACTGCTCT GCCGATTATT GAAACTCAAG CGGGTGACGT ATCTGCATTC
GTACCGACCA ACGTAATTTC GATTACCGAT GGTCAGATCT TCCTTGAAAC TGACCTATTT
AACTCTGGAC TACGTCCAGC TGTTAACCCA GGTATTTCGG TTTCTCGTGT TGGTGGTGCG
GCTCAGACTA AGATCATCAA GAAACTGTCT GGCGGTATTC GTAGCGCACT AGCACAGTAT
CGAGAGCTTG CAGCGTTCTC ACAGTTTGCA TCTGACTTAG ATGATGCAAC ACGTGCTCAG
CTTGAGCATG GTGAGCGTGT TACTGAACTT ATGAAGCAAA AACAATACGC CCCTATGAGC
GTAGCTGATC AGTCTGTGTC TATTTTCTCA GCTGAAAAAG GTTACCTAAA GAGCGTAGAG
CTTAATAAGA TTGGTGATTT CGAAGCGTCT TTGCTCTCTT ACATGAACAG CGAGCATGCT
GACCTTATGA AGACCATCAA CGAGACTGGC AACTACAATG CCGACATCGA AGGTGAGTTG
AAGGCTGGCC TCGACAAGTT CGTCGAAACT CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEQFE VVSEARNEGT IVAVSDGIIR IHGLADVMQG EMIELPGNRF
AIALNLERDS VGAVVMGPYA SLAEGDKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGP
IDNDGFSPVE MIAPGVIERK SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQIGKTALAI
DAIINQKDTG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY
SGCSMGEYFR DRGEDSLIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNAEYVE KFTKGEVKGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRSALAQY RELAAFSQFA SDLDDATRAQ
LEHGERVTEL MKQKQYAPMS VADQSVSIFS AEKGYLKSVE LNKIGDFEAS LLSYMNSEHA
DLMKTINETG NYNADIEGEL KAGLDKFVET QTW
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