Gene Swoo_4896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4896 
Symbol 
ID6119277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5891115 
End bp5892257 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content36% 
IMG OID641636481 
Producthypothetical protein 
Protein accessionYP_001763240 
Protein GI170729214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.312197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC TAATACTTAC CCCATTAAAA AACGAAAATA GAGGTGGCGA TATAATAAGA 
AGCTGCTCTA TTTCTAGACT AAACGAGGGT AAAGAGGAAA CTTCTTCACA AATACTTTGG
TTTCAATTTC CTAAAGTAAC TGAAGCTCCA GCCTCAGATG ACTGCGACAG TTACTTACTA
TCTATGCTCT TAGAAGGCAT GAAAGAGAAC AGAAAAATCA TAGTGAAAGG CTCTGTTTCA
CTAGAGTTAC TATCAAACCT AGTTGAACTT CAATCAGCAT GGAATAAGTG GCTTCCCAAA
AAATACAATG TTGTAGATAT TGAGGTCGAT TTAATAAGAG AACCAGAGCT GCGTAAAAAA
GGGGCTGTTT GTGCTTTTTC TGGTGGAGTA GATGCCACTT TTTCTGTTTG GCGCCATAGC
CAGAAAAAAC ACAGTTACCG CTCCCAACAG ATCAACCTAT GCGCACTAAT CCATGGTTTT
GATATCCCTC TTACAGAGCA AAAAGCATTT GATAATGCTT TTATACGTGC AGAAAAAACT
TTGCTGGATT TAGAGCTAAA GTTGGTTCAA ATTAAAACTA ACTACCGTGA AATATCCAAA
GTATTATGGC CTCATTCCCA CGCGCTAGCC TTAGTTGCAG CATTAAACCA ATTGAAATAT
CAAGCGGGTA CAGGCTTGAT TGGAAGTAGT GAATCTTACG ACTCATTAGT GATTCCTTGG
GGATCATCCC CAATAACAGA TCACCTATTA AGCTCAGATG AATTTACCGT TATTCATGAT
GGAGCATCTC ACAATAGAAC AGAAAAAGTA TCTGAGATAG CAGAGTGGAC AACTGGCGCC
AACAACCTAA GAGTCTGTTG GGAAGGAGAT GTTAAAGATA AAAACTGCGG CAAATGTGAA
AAATGTATCC GAACTAAATT AAATTTTTTA GCTTGCGGTT TTAGTATCCC TAAATGTTTT
CCAACCGATA CTAACTTAAC TGAACAAATC ATTAAGTTGA AATTCAGAAA TGATGTAGAA
CGAACTGAAT GGGCTGAAAT AATAAAACAT GCAGATAAAA ACAATATCAA AGCAGATTGG
AAAAAAGCAG CAAATACCGT AATAAAAAGA AAATCTTGGT ACAATTTTAT CAAATTAAAA
TAA
 
Protein sequence
MKELILTPLK NENRGGDIIR SCSISRLNEG KEETSSQILW FQFPKVTEAP ASDDCDSYLL 
SMLLEGMKEN RKIIVKGSVS LELLSNLVEL QSAWNKWLPK KYNVVDIEVD LIREPELRKK
GAVCAFSGGV DATFSVWRHS QKKHSYRSQQ INLCALIHGF DIPLTEQKAF DNAFIRAEKT
LLDLELKLVQ IKTNYREISK VLWPHSHALA LVAALNQLKY QAGTGLIGSS ESYDSLVIPW
GSSPITDHLL SSDEFTVIHD GASHNRTEKV SEIAEWTTGA NNLRVCWEGD VKDKNCGKCE
KCIRTKLNFL ACGFSIPKCF PTDTNLTEQI IKLKFRNDVE RTEWAEIIKH ADKNNIKADW
KKAANTVIKR KSWYNFIKLK