Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4896 |
Symbol | |
ID | 6119277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5891115 |
End bp | 5892257 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641636481 |
Product | hypothetical protein |
Protein accession | YP_001763240 |
Protein GI | 170729214 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.312197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAC TAATACTTAC CCCATTAAAA AACGAAAATA GAGGTGGCGA TATAATAAGA AGCTGCTCTA TTTCTAGACT AAACGAGGGT AAAGAGGAAA CTTCTTCACA AATACTTTGG TTTCAATTTC CTAAAGTAAC TGAAGCTCCA GCCTCAGATG ACTGCGACAG TTACTTACTA TCTATGCTCT TAGAAGGCAT GAAAGAGAAC AGAAAAATCA TAGTGAAAGG CTCTGTTTCA CTAGAGTTAC TATCAAACCT AGTTGAACTT CAATCAGCAT GGAATAAGTG GCTTCCCAAA AAATACAATG TTGTAGATAT TGAGGTCGAT TTAATAAGAG AACCAGAGCT GCGTAAAAAA GGGGCTGTTT GTGCTTTTTC TGGTGGAGTA GATGCCACTT TTTCTGTTTG GCGCCATAGC CAGAAAAAAC ACAGTTACCG CTCCCAACAG ATCAACCTAT GCGCACTAAT CCATGGTTTT GATATCCCTC TTACAGAGCA AAAAGCATTT GATAATGCTT TTATACGTGC AGAAAAAACT TTGCTGGATT TAGAGCTAAA GTTGGTTCAA ATTAAAACTA ACTACCGTGA AATATCCAAA GTATTATGGC CTCATTCCCA CGCGCTAGCC TTAGTTGCAG CATTAAACCA ATTGAAATAT CAAGCGGGTA CAGGCTTGAT TGGAAGTAGT GAATCTTACG ACTCATTAGT GATTCCTTGG GGATCATCCC CAATAACAGA TCACCTATTA AGCTCAGATG AATTTACCGT TATTCATGAT GGAGCATCTC ACAATAGAAC AGAAAAAGTA TCTGAGATAG CAGAGTGGAC AACTGGCGCC AACAACCTAA GAGTCTGTTG GGAAGGAGAT GTTAAAGATA AAAACTGCGG CAAATGTGAA AAATGTATCC GAACTAAATT AAATTTTTTA GCTTGCGGTT TTAGTATCCC TAAATGTTTT CCAACCGATA CTAACTTAAC TGAACAAATC ATTAAGTTGA AATTCAGAAA TGATGTAGAA CGAACTGAAT GGGCTGAAAT AATAAAACAT GCAGATAAAA ACAATATCAA AGCAGATTGG AAAAAAGCAG CAAATACCGT AATAAAAAGA AAATCTTGGT ACAATTTTAT CAAATTAAAA TAA
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Protein sequence | MKELILTPLK NENRGGDIIR SCSISRLNEG KEETSSQILW FQFPKVTEAP ASDDCDSYLL SMLLEGMKEN RKIIVKGSVS LELLSNLVEL QSAWNKWLPK KYNVVDIEVD LIREPELRKK GAVCAFSGGV DATFSVWRHS QKKHSYRSQQ INLCALIHGF DIPLTEQKAF DNAFIRAEKT LLDLELKLVQ IKTNYREISK VLWPHSHALA LVAALNQLKY QAGTGLIGSS ESYDSLVIPW GSSPITDHLL SSDEFTVIHD GASHNRTEKV SEIAEWTTGA NNLRVCWEGD VKDKNCGKCE KCIRTKLNFL ACGFSIPKCF PTDTNLTEQI IKLKFRNDVE RTEWAEIIKH ADKNNIKADW KKAANTVIKR KSWYNFIKLK
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