| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4894 |
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| Symbol | |
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| ID | 6119275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5887190 |
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| End bp | 5889334 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636479 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001763238 |
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| Protein GI | 170729212 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.142345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.811526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTA TAAAGCGTGT TTTGAAAAAT CGTATTTTTA ACTATTCATC TATCAGTATT
GCAATATTCT CTGCACTATC TGCTACTTCA GTTGTTGCTG AAGAGCTGGA AAGCATAGAG
ATACCTACAG CTAATATTGA ACGTATTACT GTTACCGGTC GAAGCTTTAA TGATTACAAA
GCTGGAACGG CATCAGGCGC TATGCGTGGT GATATCGATT TGATGGACAC TCCTCAATCG
GTCAATGTTA TTCCTGACTT TGTGACCGAT GAGCAGTTGG CAACCAATCT TTCTGAAGTA
CTGGTTAACG ATTCAAGTGT GACTGGTGGC TCTGAGAAGT GGAACCGTCA GGTATTTAGT
ATTCGTGGTT TTGAACTATC TTCAGGTTCA GGTTATTTGA TTAATGGTCA GCAGCAGTGG
TCTCACTATG TGCAGCCTAT TGAAACATTA CAGCAAGTTG AGGTACTAAA AGGTCCATCT
TCTATGTTGT ATGGTCAATC TGGCCCTGGT GGTTTGATCA ACATGGTGAC CAAGAAGCCA
ACTTACGAGA CGATGCTTGA TATCGGTTTT GATACCGATG AACATGGCTC TACTCGCTTT
CAATTAGATG CAGGTGGCAG TCTAAACGAA GCTGAAACGA TCCGTTACCG TACAGTGTTA
GTAAAGCAAG ACACTAACTA CTGGCGTGAA TATCAAGATG GCACTAACCA AGAGCGTGAT
CGCTGGTTAG GTTACTTAAA TCTAGAGTTT GATATCACTG ACGATCTACT CCTGTCACTT
AAGTATGATC ACACTCAAGA TAAGACAGGT ATCGATACCG GAGGCTGGTT AAACAGCAGT
GGTGACTTAA TTGGTGGCCG TGACATTATC TGGGATCAGC CATGGGCATT TACCGATAAT
ACCATCACTA ATATGGGCGC GGATATCGTT TACCACATCA GTGATGATTG GAAGGTAAAA
GCGGGTTATA ACGATCAGCA GTTTAACCGT CAGCGCTTAG ATTCATCGCC TCAATACTCT
GAAGACCCAT TCAGTAATGG TTACACGGTG AAGCCGTTCG ATCGCTATGA TGACTGGCAG
CATAAAACAA GTTATATGGA CTTTGTGGGT GAGTTCTCAA CTGGCGGACT CGATCATCAG
TTCCTGATTG GCGCTAATAT GCTGGACTAT TACTATGGCC AGTTACGGGT AAAAGGTGCA
CCAGAGACAG TTATTCCTGG TCAGCCAATC GCTAACCCTG GACTGGATTA CAATGATGAT
GACTCTAAGT ATGAGAGTGA TTATAAGCAC TACGGCTTCT ATATTCAGGA TCTGATCACC
ATTAATGACA GTTGGCAGGT GCTTGCTGGT GTTCGCTACG ATGAGCAGAA AAAAGATGGC
GAAGGCAATA ACAGCTACGC AGTTTCACCT AAGTTTGGTG TTATCTACTC GCCCGCTGAT
AACGGCAGCA TCTATGTAAA CTACTCTAAG AGCTTTACAC CGCAAGGGAT CGTTAACGAT
TCTGAAGATG TGAATGACAA GATGAACCTT GAGCCTGAGT ATGGTGAACA GTATGAGATA
GGCACAAAGT GGGAGTTGTT TAACGATAGC TTGCTGCTTA CCGCAGCAGT ATTCGATATC
ACTGTATCAA ACGTCACAGT GACAGAAGAT CTTACTAACC CTATTTCTGG TGGCCATCAA
ACTATTACGA CCCAAAGTGG CGAACAACGT CATAAAGGTT TCGAGATGGG CGCTCAAGGT
CAGGTTAGTG ATAACTGGTT CTTAACCGGT TCTATGATGT ACCTTAACGC TGAGTATCAA
AGACCTGAAG GCGATAAGTT AAATGGTAAG ACACCTATTG ATGCACCAGA ATGGTCGGCT
AACGTCTGGA CTCGTTATGA GATGACCGAT GATTTAGCCC TTAACTTTGG TGCTGTCTAT
GTGGGCGAGC GTTTCGCTAA TACAGAGAAT ACTATCTCTA AAGATGGTTA TGTACGTTTC
GATATGGGCG CAGCCTACTC AATGGATGTG ATGGGCAGTG ATGTGAGCGT GCGTTTGAAC
GTGAAGAACC TATTTGATAC TGACTACATT GCTGGTGGTA ACTACAAAGA TGTCACAGTG
GGTGAAGGTC GTCACTTTGG TTTAGCTTTG GAAGCTAAGT TCTAA
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| Protein sequence | MSSIKRVLKN RIFNYSSISI AIFSALSATS VVAEELESIE IPTANIERIT VTGRSFNDYK
AGTASGAMRG DIDLMDTPQS VNVIPDFVTD EQLATNLSEV LVNDSSVTGG SEKWNRQVFS
IRGFELSSGS GYLINGQQQW SHYVQPIETL QQVEVLKGPS SMLYGQSGPG GLINMVTKKP
TYETMLDIGF DTDEHGSTRF QLDAGGSLNE AETIRYRTVL VKQDTNYWRE YQDGTNQERD
RWLGYLNLEF DITDDLLLSL KYDHTQDKTG IDTGGWLNSS GDLIGGRDII WDQPWAFTDN
TITNMGADIV YHISDDWKVK AGYNDQQFNR QRLDSSPQYS EDPFSNGYTV KPFDRYDDWQ
HKTSYMDFVG EFSTGGLDHQ FLIGANMLDY YYGQLRVKGA PETVIPGQPI ANPGLDYNDD
DSKYESDYKH YGFYIQDLIT INDSWQVLAG VRYDEQKKDG EGNNSYAVSP KFGVIYSPAD
NGSIYVNYSK SFTPQGIVND SEDVNDKMNL EPEYGEQYEI GTKWELFNDS LLLTAAVFDI
TVSNVTVTED LTNPISGGHQ TITTQSGEQR HKGFEMGAQG QVSDNWFLTG SMMYLNAEYQ
RPEGDKLNGK TPIDAPEWSA NVWTRYEMTD DLALNFGAVY VGERFANTEN TISKDGYVRF
DMGAAYSMDV MGSDVSVRLN VKNLFDTDYI AGGNYKDVTV GEGRHFGLAL EAKF
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