| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4879 |
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| Symbol | |
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| ID | 6119256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5866337 |
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| End bp | 5867542 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641636460 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001763223 |
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| Protein GI | 170729197 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAC TTATACGTTA TCTATCCTTC ACTCTGTTAG GCTTGGCGTT GGGCGTTTCT
CTAACCCTAT CAAGTCAAGA AAATGCAGAA CAAGCTCAAT CGCGTCTAAA CTATCCACTG
CTTCTCGATA TCATAGATAC AGTTGAAACT TACTATGTCA CAGAGTTCAC CCAAGATGAG
TTAATCGCGG CGGCCATTGA GGGGATCTTT GCTAAGCTGG ATCCCTACTC AAACTTTCTC
GATCAACAAG AGTTCTCCAA CATCAGGGAT GCCAATAAAG GAGAGTACTT TGGCTTTGGT
GTCGAAATTG CCACTGAAGA TAATAAAATC ACCATCATCA CCCCATTTGC AAACTCCCCG
GCGGATCTTG CTGGTATAGA ACCAGGCGAT CAGATACTCA AACTTAACAA TGAGCCCGTC
GACTCCAACA GATTAGATTA CCTGTTAAAA GAGATTAAAC GGCACAGTCA GAATAACTTG
CCAATCTTGC TGACCTTAAG CCATACAGGT ATGGACACTG AGTTTGAAGT GACTCTTATC
CCTAGCGTTA TCTCAATCCA GTCAGTTAGC GCCAAAGTTA TTGAAGATCA AATTGGCTAT
ATAAGATTAG CCAGCTTTCA GGACAACTCT ACAGAAGAGT TAGTTAAACA GTTAACTCAG
TGGCAAGATG TCAGACTCTC CGGCATTATT CTCGATCTAA GAAACAACCC TGGCGGTCTA
TTAGATCAAG CCATAAAAAT TGCAGATATC TTCCTATCTA AAGGAAGAAT AGTATCAACG
GAGGGACGTT TTTTTGATGC CAATTCAGAG TATTACGCCT CACCACAGAC CATGTTATCC
AATATTCCAA TGACCATACT CATCAATAAA GGCTCAGCCT CTGCCTCAGA GGTACTTGCA
GCAGCGCTGC AGGAAAATCA CAGAGCAAAA GTGATAGGTG AGACCAGTTT TGGCAAGGGA
ACCGTGCAAA GTTTAATTCC CACGCTAATT GAGGGAAACG CTATTAAACT CACCATAGCG
AAATACACGA CGCCAAATGG TCGTGACATC AACAGCAAAG GTATAGAGCC TGATATAAAA
CTGGATCTTA CGACTGTTAC AAACAACAAA AATGTGCCTA TAATCGACGA AATCATAATT
CAAGATGAAA GCACACAAGA TAAAATTCTG AATTCTGCAA TTACTTGGAT TAAAACAAAA
CAATAA
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| Protein sequence | MSQLIRYLSF TLLGLALGVS LTLSSQENAE QAQSRLNYPL LLDIIDTVET YYVTEFTQDE
LIAAAIEGIF AKLDPYSNFL DQQEFSNIRD ANKGEYFGFG VEIATEDNKI TIITPFANSP
ADLAGIEPGD QILKLNNEPV DSNRLDYLLK EIKRHSQNNL PILLTLSHTG MDTEFEVTLI
PSVISIQSVS AKVIEDQIGY IRLASFQDNS TEELVKQLTQ WQDVRLSGII LDLRNNPGGL
LDQAIKIADI FLSKGRIVST EGRFFDANSE YYASPQTMLS NIPMTILINK GSASASEVLA
AALQENHRAK VIGETSFGKG TVQSLIPTLI EGNAIKLTIA KYTTPNGRDI NSKGIEPDIK
LDLTTVTNNK NVPIIDEIII QDESTQDKIL NSAITWIKTK Q
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