Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4873 |
Symbol | |
ID | 6119250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5859918 |
End bp | 5861102 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636454 |
Product | hypothetical protein |
Protein accession | YP_001763217 |
Protein GI | 170729191 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACATC ATGACGTAAT CATTATCGGT GCAGGTGCTG CGGGTCTTAT GTGTGCAGCT ACCGCAGGTT ACCGAGGCCG TGATGTACTT GTTCTCGATA ATGCTAAGCA AGCGGGTCGC AAAATACTGA TCAGTGGTGG TGGGCGTTGT AACTTCACCA ATCAAAAAGT TGAGCCTAAT AACTTTATCT GCAGTAATAA TCACTTTGTA AAATCCGCTT TAGCTCGTTA CCGCTCGAGC GACTTTATTG AGTTGGTCGA ACGCCATGGC ATTGAGTATC ACGAGCGAGA TCACGGCCAA CTATTCTGTA ATGACTCAGC TAAAGAGATC GTCACCATGC TGATGACCGA GTGCGAGTGG GCTGGGGCTA AAGTTAAGCT AAGAACAGAG ATTAACGCCA TCGTAAAGTT AGAGTCTGGT CAGTTTCAGC TGATGACAGA TAAAGGTGAA TTCGTCTGTG ACTCTTTAGT TATCGCTACT GGCGGCCTCT CTATGCCTAA GCTTGGTGCC AGTCCGTTTG GTTATCATCT AGCAGAGCAG TTTGGCCTTA AAGTGTTACC GACTCATGCA GGCCTAGTTC CTTTTACTTG GCATAGCGAT CAAAAGATAA AGTTCGAACC TCTTTCAGGA ATAGCTGTGC CAAGCACGAT CACTGCTAAA GATGGCACTC AATTTAGCGA AGCTTTGCTT TTTACTCATA GAGGTTTATC TGGCCCTGCC ATATTGCAGA TCTCAAACTT CTGGAAGCCT GGTGAAACCA TTAGCATCAA TTTGCTGCCC GGCATCGATG TCCGCGCTGC TATCGGGCTA ATACTAGCTA ACCATCCTAA GCAGAATCTG AGAAATAGCC TAAGCCACTG GCTTCCAAAG CGTTTAGTTG AGGCTCTGTT TGAAGAAACT TTGCTTAACA AGTCGATGAA TCAACTGATT CATAGTGAGT TGGAGCAAGT TGCCGTCTCT CTCGAGTCTT GGGAGATCTT GATGAATGGC ACTGAAGGTT ACCGCACTGC GGAGGTCACC TTAGGTGGCG TCGATACCGA TGAGTTGTCA TCGAAAACCA TGGAGGCTAA AACTGTCTCT GGCCTATTTT TTATCGGTGA AGTGATGGAT GTCAGCGGTT GGCTGGGAGG TTTCAACTTC CAGTGGGCTT GGTCATCTGG TGTGGCAGCA GGACAGGCTG TTTAA
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Protein sequence | MKHHDVIIIG AGAAGLMCAA TAGYRGRDVL VLDNAKQAGR KILISGGGRC NFTNQKVEPN NFICSNNHFV KSALARYRSS DFIELVERHG IEYHERDHGQ LFCNDSAKEI VTMLMTECEW AGAKVKLRTE INAIVKLESG QFQLMTDKGE FVCDSLVIAT GGLSMPKLGA SPFGYHLAEQ FGLKVLPTHA GLVPFTWHSD QKIKFEPLSG IAVPSTITAK DGTQFSEALL FTHRGLSGPA ILQISNFWKP GETISINLLP GIDVRAAIGL ILANHPKQNL RNSLSHWLPK RLVEALFEET LLNKSMNQLI HSELEQVAVS LESWEILMNG TEGYRTAEVT LGGVDTDELS SKTMEAKTVS GLFFIGEVMD VSGWLGGFNF QWAWSSGVAA GQAV
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