Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4862 |
Symbol | |
ID | 6119239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5851698 |
End bp | 5852540 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641636443 |
Product | ABC transporter related |
Protein accession | YP_001763206 |
Protein GI | 170729180 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCA AGCTAGAACC GCTCCTCGAA CTTTGTGATG TAACTAAACA ATTTGTCGAT AAAACAGCGA TTAGTAAGCT GAGTATCCAG TTGTACCCAG GTATGGTCGT AGGGCTACTT GGTCAAAATG GTGCAGGTAA ATCGACATTA ATGCGCTGTG CTTTGGGGAT TATTGAGCCG AGCAGCGGCA AAATAACCAC TTTAGGTGAG CCTGTTCAAC AACTGAGCTC AGAGGCAAAG ACTCAAATTG GCTATGTGCC ACAGCAGCCC TTCGGTTATG AAGGCTTCTC CATTTCCAGA GCATTAGAAC TGCATAGAAG TTTTTACCCT GAGTGGGATA AAGAGTTAGA GCGGGAGTGG TTGCAGCGTT TTGACTTAGA TACTAAGCAG CAAGTTCAGC GACTCTCTGT GGGACAACGT CAATCTTTAG CGCTGATCAT GGCGATGGCA TATCGCCCCA AGTTACTTAT TCTAGATGAG CCAGTGGCGA GTTTAGATCC CATTGCACGT CGAGCATTTA TGTCTGATCT GTTTGAGTTA GCGATAGAAT CAGGTTCAGC AGTGCTGTTT TCATCCCATA TCACCTCAGA TCTCGAACGT GTTGCCAGCC ACTTAGCGTT AATGCGAGAG GGGGAGTTGG TTCTCTTTAA GGAGATGGAT AGCGTAAGAG AGGAGGTGAA GTTACTTACT TTAGCTGATG GTGAGGTATT AGAAGCAGAT ATACGGGTTC TGAATAGACT GGGTAATAAA GTGCTGGTGG ACAATTTTTG CGCTGCTCAG TATCCAGATA TTAAGTCAGA GTCGATGAAT CTTGAGCAAC TCTTTATGGC GCTTCACCAA TGA
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Protein sequence | MDIKLEPLLE LCDVTKQFVD KTAISKLSIQ LYPGMVVGLL GQNGAGKSTL MRCALGIIEP SSGKITTLGE PVQQLSSEAK TQIGYVPQQP FGYEGFSISR ALELHRSFYP EWDKELEREW LQRFDLDTKQ QVQRLSVGQR QSLALIMAMA YRPKLLILDE PVASLDPIAR RAFMSDLFEL AIESGSAVLF SSHITSDLER VASHLALMRE GELVLFKEMD SVREEVKLLT LADGEVLEAD IRVLNRLGNK VLVDNFCAAQ YPDIKSESMN LEQLFMALHQ
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