| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4860 |
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| Symbol | |
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| ID | 6119237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5848491 |
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| End bp | 5850287 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641636441 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001763204 |
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| Protein GI | 170729178 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG AGCAATACCA CGTAACACGT TTAATTAAAC AGCAAAGCCA TGAAATGGGT
GATGCTATCG CGCTCGAAGG ATTCGAAATG GCGGCCCCAT GGCATCAGGT TAGCTGGCAT
GATTTTGATA GCATCAGCTC TCAAATTGCT CAGGCGATGA TCAATCTAGG CCTAGAAGTA
CAAGACCGAG CTGTTATCCT GTCACAAAAC TGTCCCCAGT GGACCTGTGC GGATGTGGCC
ACTCTTAAGG CAAGGGTGAT CGTGGTACCT ATCTACCCGA CGAGCACCTT TGAACAAGCT
AAATATATTG TTGATGATGC AAAAGCTAAG TTAATTTTTG CTGGTGATGA AGCTCACTAT
CAGATGGCTT GTGAGCTTGC TGAGCAGTGT GACAGCCTAG TTCATATCAT TGTACTTGAT
AAAAATATTT CACTTCAAGA TAAGCCAGGT CATTACTATT TTGATGATCT TATTGAAAAT
GCATACTCTT CAGATGTGTT AGTTGAACTG AATCAACGCT TAGAAGATGC CAATCTTGAT
GATCTGCTGA CCTTAATCTA TACCTCTGGC ACTACGGGTG ACCCTAAAGG CGTGATGTTG
GATTACCGTA ACATTGCTTC TATGGTGCGT CAGCATGATA ACTTTTTACC TTTTACTCCG
GGTGATGTTT CACTGGCATT TTTGCCATTG AGTCATGTAT TTGAGCGTGG CTGGAGCTTC
TACGTGCTCT GTCGTGGAGG GCATAATGTT TATCTTAAAG ATCCTATGGC AGTAAAAGAG
GCCATTGTGC AAGTACGTCC TCACACCTTA TGTGTTGTGC CTAGGTTCCT TGAGAAGGTA
TATAGCGCAG TTCAGGATAA AGTGATTAAA GCCCCTGAGC TTAGACAGAA GATGTTTACT
TGGGCTATGT CTGTTGGCCA TAAGCAGTCA GAAGTAGGTC AAGGGCGGCA TAAAGCATCT
TTAGGCTTAA GCTTACAGTG GAGATTGGCG AACAAACTGG TTTTCAGTAA GTTAAAGCAA
GTATTAGGTG GTCGACTTAA ATTCATGCCT GTTGGTGGTG CTGCACTAGA TCCTAATGTG
AGTGCATTTT TCCAGAGTAT TGATGTTCCG GTGCTTTGTG GTTATGGAAT GACGGAGACC
ACAGCGACGG CAACCTGTAA TACCTTAAGT AATCGTGTAC CTGGCTCTAA CGGTAAGGTG
ATCCCTGAGG TTGAGATAAA ACTAGGCAAA GATAACGAGA TATTAGTCCG TGGTGATACT
GTGATGCGCG GTTACTATAA CCGTCCGCAA GAGACCGCAG AGACCTTCGA GAATGGCTGG
TTGAAAACTG GTGATGCGGG TCGTATCGAT GAACAGGGAA ATCTGTTTAT CACCGACCGT
ATTAAGGAGC TGATGAAGAC CTCCAATGGT AAGTATATTG CGCCTCAACG TGTCGAAGGG
AAGGTTGGTT GTTGCCCCTT CATCGAGCAG GTTGCCATTG TCGCCGATGC GAAGAATTAT
GTTTCAGCTT TGATTGTTCC TGCATTTGAA ACTTTGGAAG TGTGGGCTAA AGAGAAGGGG
ATTCATTATG AGTCCCCGAT AGAGCTGCTA CGTAACAATC GTGTGATTGA GCACTTTGAG
CAGCGTTTAA AGACACTACA GAGTGAGTTA GCTGGTTTTG AGAAGATTAA AAAGTTTACA
CTCTTACCTG AGGCTTTTTC GATGGAAGCG GGACTTATCA CACCCACGAT GAAGCTACGC
CGTAAGGTCA TCTATAATAA GTACGCGTGC GAGATCGATA AGATGTATGC GAGATAA
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| Protein sequence | MSLEQYHVTR LIKQQSHEMG DAIALEGFEM AAPWHQVSWH DFDSISSQIA QAMINLGLEV
QDRAVILSQN CPQWTCADVA TLKARVIVVP IYPTSTFEQA KYIVDDAKAK LIFAGDEAHY
QMACELAEQC DSLVHIIVLD KNISLQDKPG HYYFDDLIEN AYSSDVLVEL NQRLEDANLD
DLLTLIYTSG TTGDPKGVML DYRNIASMVR QHDNFLPFTP GDVSLAFLPL SHVFERGWSF
YVLCRGGHNV YLKDPMAVKE AIVQVRPHTL CVVPRFLEKV YSAVQDKVIK APELRQKMFT
WAMSVGHKQS EVGQGRHKAS LGLSLQWRLA NKLVFSKLKQ VLGGRLKFMP VGGAALDPNV
SAFFQSIDVP VLCGYGMTET TATATCNTLS NRVPGSNGKV IPEVEIKLGK DNEILVRGDT
VMRGYYNRPQ ETAETFENGW LKTGDAGRID EQGNLFITDR IKELMKTSNG KYIAPQRVEG
KVGCCPFIEQ VAIVADAKNY VSALIVPAFE TLEVWAKEKG IHYESPIELL RNNRVIEHFE
QRLKTLQSEL AGFEKIKKFT LLPEAFSMEA GLITPTMKLR RKVIYNKYAC EIDKMYAR
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