Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4859 |
Symbol | |
ID | 6119236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5847922 |
End bp | 5848326 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641636440 |
Product | thioesterase superfamily protein |
Protein accession | YP_001763203 |
Protein GI | 170729177 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAGA CCTTCTTCAG CTTAGATATT CAGCCCAGAT TTAATGAAAC CGATGGCTTA GGTCATATCA ATAATACTGT TATCCCGGTA TGGTTTGAGG CGGCGCGTGA ACCAGTATTT GAGATCTTTA ATCCCAGTTT AGATCTGACT AAATGGAACT TGATCGTTGC AGGTTTTACC ATCGCTTATA CCTCTCCTAC TAATTACGGT AAGTTGGTAT CGGTTAAGAC CTGGATCAGT CGTGTGGGGA ACTCAAGTTT TGAGGTGACG CAGCAAAGCT GGCAAGAGGG AAAGATGACG GCTGAAGCTA AAACCACACT GGTACACTAC GATTACGCCA TCGATAAGAG TCAGCCTATC TTTGCCGACG TTAAATCCCA GCTCTCTCAA CTGACTGGGG TTTAA
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Protein sequence | MSETFFSLDI QPRFNETDGL GHINNTVIPV WFEAAREPVF EIFNPSLDLT KWNLIVAGFT IAYTSPTNYG KLVSVKTWIS RVGNSSFEVT QQSWQEGKMT AEAKTTLVHY DYAIDKSQPI FADVKSQLSQ LTGV
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