| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4848 |
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| Symbol | |
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| ID | 6119225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5837822 |
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| End bp | 5839063 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641636429 |
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| Product | hypothetical protein |
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| Protein accession | YP_001763192 |
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| Protein GI | 170729166 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0956312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATA GAGTATTTCA TAGCGCATAT GAGGGCACTG TGGCTGCGAT TGAGTCTATT
TTTGCCCATA GTTTTAGAAG TGCACTGACC ACACTAGGTA TTATCATTGG TGTTGCTGCT
GTAATTACTG TTGTTTCTAT TATGGAGGGG TTGAGCCAAG GTGTTGGCAA CCAACTTAAG
GATTTAGGCA GTGATATGGT GACCATAAAA GCCCACACCA ATACAGAACT AGAGATGCTT
GGGGTAACGA ATCAGTTAAC CTATGACGAT TACCTGTTAA TTAAGAGTAA GGTGCCTGGT
ATTAAAGAGA TTGCAGCTAA AATGCGAGCA TTTAGTTTTG GTTCAGAGGC GAGGTTTGGT
CAATACAGTA CTCATACACA AGTTATTGGT ACAGAAAGTG ATTATCAAAA TGTAGTGAAT
ATTTTTCCAC TCGAGGGGCG TTTTCTTTCG AATACTGATG ACATAAAACG TAGACGAGTT
GTATTTGTTG GTAGTTCCGT GTTAAAAAAG TTAAATCTTC CGCAACATCC TGTTGGTGAA
TTTATATTGT TGGGAGGTGA ATGGTTCAAA GTTATTGGTG TTGCAGAAAC TAGAGGAAGC
TTATTTGGCT TCGATCAAGA TAACTATATT ATCGCACCTT TCAGCACTAT ACGTTCATTA
AATGGATCGG ATCGCACCAA TAATATTGAT ATTGTTTTTC GCCCTGAAGC GGGGGTTGAT
TTAACTTTGC TAAATGAAAG AGTTCGTAAT TTATTAAGAA GCAAATATCG ATTAACCGAG
CAAGACCAAG ATTTTTTTGA ATTTGAAACC GCTGAGAGAA CACGTAAACA ATTTAGTGAT
ATTACAGATT CTATTACCTA CGTTGCTGCC GGAGTTGTTG GTATTAGTCT AATTGTTGGT
GGCATAGGGA TTATGAACAT CATGCTTGTA TCTGTTACAG AGAGAACCAA AGAGATTGGG
ATAGCAAAAG CGCTTGGTGC TACCTCCAGA ATTATTTTGA CTCAATTTTT AGTTGAGGCC
AGTGTATTAG CTCTTTTTGG AGGGATTGTC GGTATCTTAT TAGGTTACCT GCTTGCTGGT
GTTGTATTTA TGTTCATGCC TGTCATTGGT TCTTTGTCAG TACCTACATG GGCTATTTGG
CTTGCACTTG GTTTTAGTGG AACAATTGGT GTTGTATTTG GTATTGCTCC TGCAATTAAA
GCTTCAAAAC TGGATCCGAT AGATGCCTTA CGCTATGAGT AG
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| Protein sequence | MLNRVFHSAY EGTVAAIESI FAHSFRSALT TLGIIIGVAA VITVVSIMEG LSQGVGNQLK
DLGSDMVTIK AHTNTELEML GVTNQLTYDD YLLIKSKVPG IKEIAAKMRA FSFGSEARFG
QYSTHTQVIG TESDYQNVVN IFPLEGRFLS NTDDIKRRRV VFVGSSVLKK LNLPQHPVGE
FILLGGEWFK VIGVAETRGS LFGFDQDNYI IAPFSTIRSL NGSDRTNNID IVFRPEAGVD
LTLLNERVRN LLRSKYRLTE QDQDFFEFET AERTRKQFSD ITDSITYVAA GVVGISLIVG
GIGIMNIMLV SVTERTKEIG IAKALGATSR IILTQFLVEA SVLALFGGIV GILLGYLLAG
VVFMFMPVIG SLSVPTWAIW LALGFSGTIG VVFGIAPAIK ASKLDPIDAL RYE
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