Gene Swoo_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4840 
Symbol 
ID6119217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5828540 
End bp5829766 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content49% 
IMG OID641636421 
Productimidazolonepropionase 
Protein accessionYP_001763184 
Protein GI170729158 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGGG ATCAGGTCTG GATTGACGTC AACGTAGCAA GTATGGACCC TTCTGTATCA 
GCACCTTACG GCGCAATAAT AGATGCAGCG CTAGCTGTAA AAGATGGAAA AATTGCCTGG
GTGGGACCCA GAGGAGAGCT GCCTGAGTTT GATGTGATGT CAACGCCACT TTACAGAGGT
AAAGGTGGCT GGATCACACC CGGACTTATC GACGCCCACA CACACCTAGT CTTTGCCGGT
AACCGCGCGA ACGAATTCGA AAAACGCTTA CAAGGTGCTA GCTATGAAGA GATAGCTCGT
AGCGGAGGCG GGATAATCTC CACCGTTAAA GCCTGCCGTG AAGCCAGTGA AGCAGAGCTA
TTTGAGCTTG GAAGAAAACG CCTTAATGCG CTTGCAAAAG AGGGAGTGAC TACAGTTGAG
ATAAAGTCTG GCTATGGTTT AGACACGGCA ACAGAGCTGA AACTTTTACG TGTCGCCCGT
GAGCTAGGCA AGCACCACCA TGTCGATGTG AAGACCACTT TCTTAGGTGC CCACGCTATT
CCACCAGAGT ATAAAGATGA CGTCGAAGGC TATGTTGATT TAGTCATCAA CGAGATGTTG
CCCGCTGTTA TTGCTGAAGA TTTAGCCGAT GCCGTCGATG TATTCTGTGA AAACATCGCA
TTCAATATTG AGCAAACAGA GCGGGTACTC ACTGCAGCCA AAGATGCGGG ATTGGATATC
AAGCTTCATG CCGAGCAACT CTCAAACTTA GGCGGCTCAA CCATGGCCGC CAAACTTGGC
GCTAAATCAG TGGATCACAT TGAATATCTT GATGAAGATG GAGTGGTAGC ACTAAGTAAA
AGTGGTACCT GTGCCACCCT ATTACCTGGG GCGTTCTACT TCCTGCGTGA AACCCAGATG
CCACCGATAG ATCTACTACG TAAACATAAA GTGCCTATGG TACTGGCCAG TGACTATAAC
CCAGGCTCGT CACCACTATG CTCAAGCCTA CTGATGCTAA ATATGGGTTG CACTCTATTT
CGCTTAACAC CGGAGGAAGC TTTAGCAGGC ATGACTCGCA ATGCCGCCAA GGCACTCGGT
GTTGAAGACA AAGTTGGCGT GTTAGCTGCT GGTATGCAAG CGGATTTCTG TTTGTGGGAT
ATCAGTACAC CAGCAGAGCT TGCCTACTCC TATGGCGTTG GAGTGTGCCT TGAAGTGGTG
AAAGACGGTC ACTTAGTACA TCAGTAA
 
Protein sequence
MSWDQVWIDV NVASMDPSVS APYGAIIDAA LAVKDGKIAW VGPRGELPEF DVMSTPLYRG 
KGGWITPGLI DAHTHLVFAG NRANEFEKRL QGASYEEIAR SGGGIISTVK ACREASEAEL
FELGRKRLNA LAKEGVTTVE IKSGYGLDTA TELKLLRVAR ELGKHHHVDV KTTFLGAHAI
PPEYKDDVEG YVDLVINEML PAVIAEDLAD AVDVFCENIA FNIEQTERVL TAAKDAGLDI
KLHAEQLSNL GGSTMAAKLG AKSVDHIEYL DEDGVVALSK SGTCATLLPG AFYFLRETQM
PPIDLLRKHK VPMVLASDYN PGSSPLCSSL LMLNMGCTLF RLTPEEALAG MTRNAAKALG
VEDKVGVLAA GMQADFCLWD ISTPAELAYS YGVGVCLEVV KDGHLVHQ