Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4840 |
Symbol | |
ID | 6119217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5828540 |
End bp | 5829766 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641636421 |
Product | imidazolonepropionase |
Protein accession | YP_001763184 |
Protein GI | 170729158 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGG ATCAGGTCTG GATTGACGTC AACGTAGCAA GTATGGACCC TTCTGTATCA GCACCTTACG GCGCAATAAT AGATGCAGCG CTAGCTGTAA AAGATGGAAA AATTGCCTGG GTGGGACCCA GAGGAGAGCT GCCTGAGTTT GATGTGATGT CAACGCCACT TTACAGAGGT AAAGGTGGCT GGATCACACC CGGACTTATC GACGCCCACA CACACCTAGT CTTTGCCGGT AACCGCGCGA ACGAATTCGA AAAACGCTTA CAAGGTGCTA GCTATGAAGA GATAGCTCGT AGCGGAGGCG GGATAATCTC CACCGTTAAA GCCTGCCGTG AAGCCAGTGA AGCAGAGCTA TTTGAGCTTG GAAGAAAACG CCTTAATGCG CTTGCAAAAG AGGGAGTGAC TACAGTTGAG ATAAAGTCTG GCTATGGTTT AGACACGGCA ACAGAGCTGA AACTTTTACG TGTCGCCCGT GAGCTAGGCA AGCACCACCA TGTCGATGTG AAGACCACTT TCTTAGGTGC CCACGCTATT CCACCAGAGT ATAAAGATGA CGTCGAAGGC TATGTTGATT TAGTCATCAA CGAGATGTTG CCCGCTGTTA TTGCTGAAGA TTTAGCCGAT GCCGTCGATG TATTCTGTGA AAACATCGCA TTCAATATTG AGCAAACAGA GCGGGTACTC ACTGCAGCCA AAGATGCGGG ATTGGATATC AAGCTTCATG CCGAGCAACT CTCAAACTTA GGCGGCTCAA CCATGGCCGC CAAACTTGGC GCTAAATCAG TGGATCACAT TGAATATCTT GATGAAGATG GAGTGGTAGC ACTAAGTAAA AGTGGTACCT GTGCCACCCT ATTACCTGGG GCGTTCTACT TCCTGCGTGA AACCCAGATG CCACCGATAG ATCTACTACG TAAACATAAA GTGCCTATGG TACTGGCCAG TGACTATAAC CCAGGCTCGT CACCACTATG CTCAAGCCTA CTGATGCTAA ATATGGGTTG CACTCTATTT CGCTTAACAC CGGAGGAAGC TTTAGCAGGC ATGACTCGCA ATGCCGCCAA GGCACTCGGT GTTGAAGACA AAGTTGGCGT GTTAGCTGCT GGTATGCAAG CGGATTTCTG TTTGTGGGAT ATCAGTACAC CAGCAGAGCT TGCCTACTCC TATGGCGTTG GAGTGTGCCT TGAAGTGGTG AAAGACGGTC ACTTAGTACA TCAGTAA
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Protein sequence | MSWDQVWIDV NVASMDPSVS APYGAIIDAA LAVKDGKIAW VGPRGELPEF DVMSTPLYRG KGGWITPGLI DAHTHLVFAG NRANEFEKRL QGASYEEIAR SGGGIISTVK ACREASEAEL FELGRKRLNA LAKEGVTTVE IKSGYGLDTA TELKLLRVAR ELGKHHHVDV KTTFLGAHAI PPEYKDDVEG YVDLVINEML PAVIAEDLAD AVDVFCENIA FNIEQTERVL TAAKDAGLDI KLHAEQLSNL GGSTMAAKLG AKSVDHIEYL DEDGVVALSK SGTCATLLPG AFYFLRETQM PPIDLLRKHK VPMVLASDYN PGSSPLCSSL LMLNMGCTLF RLTPEEALAG MTRNAAKALG VEDKVGVLAA GMQADFCLWD ISTPAELAYS YGVGVCLEVV KDGHLVHQ
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