Gene Swoo_4830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4830 
Symbol 
ID6119207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5818384 
End bp5819142 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID641636411 
Producthypothetical protein 
Protein accessionYP_001763174 
Protein GI170729148 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATCT TGTTTATCGC GCTAGAGCAA CACCCTAAAT ACCCACTTAT CGTCTGTGCT 
AATCGTGATG AGTTTCATCA CCGGCCCACA CAACAAGCCC ACTTCTGGAT GCCAGAAAAC
GAGTTACTCG CAGGGAAAGA TCTTCAGTCA GGTGGAAGTT GGCTTGGAGT AAACCGGCTC
GGTGACTTCG CCGCGCTAAC AAACTTTAGA GATCCACAAG CGCAGCAAGA TGGAATGAGA
AGCCGTGGTG AGTTGGTCAT CAATGCCCTT AAACACCATG AACCTATGAC CACTGCTTGG
CTTAGGGAGC ACAGCCAAAA CTACAACCCC TTCAATCTGG TCTTCGGCAA CAGAAAAGAG
CTCTATTGCT ATAACAGTAG CCAGAAAGCA CTAACAAGGT TAACTTCAGG ATTTCACTCT
ATCAGTAACG GCGCACTAGA TGATGTCTGG CCAAAAATGG CACGGGGCAC CATTGCATTA
GAGACGAGTA TTACACAACC AGATGAGCCG GATATCCAAG CGCTGCTCGC CATCATGAAA
GATGAAACTC GCGCAGAAGA GAGTGAGCTT CCCCAGACGG GAATCGCTAT AGAGTGGGAG
CGTCTACTCT CCTCTATCTA TATCCGTCAC CCTGAGTATG GAACCCGCTC CACCAGCATC
ATATTGCAAG ATACATCAGG GAACACCCGC TTTATTGAGG TCAGGTATGA CGGTAAAGGA
CGCAACTTAG GCCAACAGGA GTTCTATTTA AGAAAGTGA
 
Protein sequence
MCILFIALEQ HPKYPLIVCA NRDEFHHRPT QQAHFWMPEN ELLAGKDLQS GGSWLGVNRL 
GDFAALTNFR DPQAQQDGMR SRGELVINAL KHHEPMTTAW LREHSQNYNP FNLVFGNRKE
LYCYNSSQKA LTRLTSGFHS ISNGALDDVW PKMARGTIAL ETSITQPDEP DIQALLAIMK
DETRAEESEL PQTGIAIEWE RLLSSIYIRH PEYGTRSTSI ILQDTSGNTR FIEVRYDGKG
RNLGQQEFYL RK