Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4830 |
Symbol | |
ID | 6119207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5818384 |
End bp | 5819142 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641636411 |
Product | hypothetical protein |
Protein accession | YP_001763174 |
Protein GI | 170729148 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCATCT TGTTTATCGC GCTAGAGCAA CACCCTAAAT ACCCACTTAT CGTCTGTGCT AATCGTGATG AGTTTCATCA CCGGCCCACA CAACAAGCCC ACTTCTGGAT GCCAGAAAAC GAGTTACTCG CAGGGAAAGA TCTTCAGTCA GGTGGAAGTT GGCTTGGAGT AAACCGGCTC GGTGACTTCG CCGCGCTAAC AAACTTTAGA GATCCACAAG CGCAGCAAGA TGGAATGAGA AGCCGTGGTG AGTTGGTCAT CAATGCCCTT AAACACCATG AACCTATGAC CACTGCTTGG CTTAGGGAGC ACAGCCAAAA CTACAACCCC TTCAATCTGG TCTTCGGCAA CAGAAAAGAG CTCTATTGCT ATAACAGTAG CCAGAAAGCA CTAACAAGGT TAACTTCAGG ATTTCACTCT ATCAGTAACG GCGCACTAGA TGATGTCTGG CCAAAAATGG CACGGGGCAC CATTGCATTA GAGACGAGTA TTACACAACC AGATGAGCCG GATATCCAAG CGCTGCTCGC CATCATGAAA GATGAAACTC GCGCAGAAGA GAGTGAGCTT CCCCAGACGG GAATCGCTAT AGAGTGGGAG CGTCTACTCT CCTCTATCTA TATCCGTCAC CCTGAGTATG GAACCCGCTC CACCAGCATC ATATTGCAAG ATACATCAGG GAACACCCGC TTTATTGAGG TCAGGTATGA CGGTAAAGGA CGCAACTTAG GCCAACAGGA GTTCTATTTA AGAAAGTGA
|
Protein sequence | MCILFIALEQ HPKYPLIVCA NRDEFHHRPT QQAHFWMPEN ELLAGKDLQS GGSWLGVNRL GDFAALTNFR DPQAQQDGMR SRGELVINAL KHHEPMTTAW LREHSQNYNP FNLVFGNRKE LYCYNSSQKA LTRLTSGFHS ISNGALDDVW PKMARGTIAL ETSITQPDEP DIQALLAIMK DETRAEESEL PQTGIAIEWE RLLSSIYIRH PEYGTRSTSI ILQDTSGNTR FIEVRYDGKG RNLGQQEFYL RK
|
| |