| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4828 |
|---|
| Symbol | |
|---|
| ID | 6119205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5815912 |
|---|
| End bp | 5816514 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641636409 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001763172 |
|---|
| Protein GI | 170729146 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCT TTTCCGCCGC AGTTATGCTG TTTCTGATCA TGGATCCGCT TGGTAATCTG
CCGATTTTTT CCTCCATTTT ACGTCATATC GATCCAAAGA AGCGGCGTAA GGTACTAATC
AGAGAGCTCT TCTTCGCTCT GATCATTATG TTGCTGTTTC TGTTCGCCGG AGAAGCGATC
CTTAATTTTC TTAACTTAAA ATCAGAGTCT GTCAGCATCG CTGGCGGTAT TATTCTCTTT
CTCATCGCGA TTAGGATGAT CTTCCCGCAG CCTGGTGGTG TGGTTGGTCT TGCAGCAGGT
GAGGAGCCCT TTATTGTTCC AATGGCAATT CCATTGATGG CTGGTCCATC GGTGCTTGCT
GCCCTTATTC TGCTGGCTCA TACCGATAGC ACACGAATGT TAGATTGGAC TATTGCTTTG
CTTGCTGCCT GGGGCGTGAG TGCCGTTATT CTTCTCTTCT ACAAGGTTTT CACTAAGGTG
TTGGGTGAGA AGGGCTTAAC TGCGGTGGAG CGTCTGATGG GAATGGTGCT TGTGATGATC
TCTGTGCAGA TGTTCCTCGA TGGCATTGCA AACTATATGG CGCACATTGG TCAGGTTAAA
TAG
|
|---|
| Protein sequence | MDTFSAAVML FLIMDPLGNL PIFSSILRHI DPKKRRKVLI RELFFALIIM LLFLFAGEAI
LNFLNLKSES VSIAGGIILF LIAIRMIFPQ PGGVVGLAAG EEPFIVPMAI PLMAGPSVLA
ALILLAHTDS TRMLDWTIAL LAAWGVSAVI LLFYKVFTKV LGEKGLTAVE RLMGMVLVMI
SVQMFLDGIA NYMAHIGQVK
|
|---|
| |