Gene Swoo_4808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4808 
Symbol 
ID6119185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5792893 
End bp5793462 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content48% 
IMG OID641636389 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001763152 
Protein GI170729126 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.130665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA TGAAATTTTT GTGTGATACC AAGCGTTGCA TCGAATGTAA TGGTTGTGTC 
ACAGCATGTA AGAACGAAAA CGACTCAGCT CTAGAGTGGG GCATTCAACG TCGCCGCGTT
GTTACCATCA ATGATGGTGT GCCAGGTGAA GCATCTATAT CAGTGGCATG TATGCACTGT
ACCGACGCTC CTTGTCAGGC TGTGTGTCCT GCAAACTGCT TCTACAAGAC TGAAGATGGC
TTAACACTGC ACAACAAAGA TACCTGTATC GGTTGTGGTT ACTGTCTCTA CGCTTGCCCA
TTTGGTGCGC CTCAGTTCCC TAAGAAGGGT GCATTTGGCA GCCGTGGCAA GATGGACAAG
TGTACTTTCT GTGCCGGTGG CCCAGAAGAG AACTTCTCAG ATGCTGAGCG TCAGAAGTAC
GGTTCTAACC GTATCGCTGA AGGTAAGCTG CCTATGTGTG CTGAGCTATG TGCGACTAAG
TCGTTACTTG CGGGTGATGC AGAGATTATC TCTTCAATCT TCCGTGAGCG TGTTGCATAC
CGTGGCTCTA AAAATGCAAT CTGGGGTTAA
 
Protein sequence
MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGVPGE ASISVACMHC 
TDAPCQAVCP ANCFYKTEDG LTLHNKDTCI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE NFSDAERQKY GSNRIAEGKL PMCAELCATK SLLAGDAEII SSIFRERVAY
RGSKNAIWG