| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4806 |
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| Symbol | |
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| ID | 6119183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5790228 |
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| End bp | 5791565 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636387 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001763150 |
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| Protein GI | 170729124 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0830506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTCAA TTATTCAATC AGCTGGCAGT GAAATTATTA AGCCTTATCA GGCTGATATT
ACTGTCCCTA ACTGGATGCT TAGCTCTATG GAGCGAGTGA TGCAGTTCTA TGTTGATAGA
AACTTGCGAC TCGATACTCA GTCGGCAGAT ATGATGCCTG CACCAGTAGA GGGTAAGAAG
TATATGCTTT ATGCCCATGT GCCTTTCTGT CACACGCTCT GCTCTTTCTG TACCTTCCAC
CGTTTCCTGT TTAAAGAAGA TAAGGCTCGC GCTTACTTTA TCTCTCTGCG TAAAGAGATG
GATATGGTGA AGGCGCTGGG TTATGACTTT GAGTCCATGT ATATCGGTGG CGGCACAACA
ACGGTGTTGG AAGATGAGCT AGCCCGTACC ATTGAGCATG CGAAAACCCT GTTTCCAAAT
ATTAAAGAGG TTTCATGTGA GTCGGATCCT CAACATTTAG ATAGTCCAGA GTTTAAACAG
CTCGAGGGTT TAGTGGATCG CATGTCTATC GGGGTGCAGA GCTTTAATGA TGATATTCTA
GCGATGACAG ATAGGCTGGA TAAGTTCGGC TCGGGTCAAC AGACATTTGA TAAGATCATG
GCGGCTAAAG AGCTGTTTCC TATCATCAAC GTCGATCTGA TCTTTGGTTT CCGTGGCCAA
ACCGATGAGA TCATTCAACA TGACTTAGAT ATGGCCTCTA AGTTAGATCC TCGTCAGATC
ACCACTTATC CCTTGATGAT CACGCATCAG ACACGTAAGA GTGTGAAAGG TAAACTGGCA
GCGTCCCAAG GAGATATGGC TCGTCAGTAT CGCCAGATCC TCAATAGTTT AAATGGACAA
TACAATCAAC TGTCTGCATG GGCGTTTGGT AAGGCTAACA ACGAAGGTTT CGATGAGTAC
GTTATCGATT ATGATGAGTA TTTAGGTGTG GGCTCTGGGT CATTTAGCTT CTTGGATGAC
ACCCTTTATG TGAATAACTT CTCCCTTAGA AAGTACCATG AGAATATTAA TGCAGGACGC
ATGGGTGTTG AGCAGCAGAA GAATTACAGC AAGAAGGATG TGATGCAGTA TCGCTTCCTA
CTGGGGATGT TCTCAGGCCG TTTGTCCCGT AAATATTTCC GTGAAACTTT TGGTGTAAAC
TTAGATACCG CACTCTTTAA AGAGATGACC TCGATGAAGG TGATCGGTGC AATTAAGAAT
GACCCAACCG ACCCTGATAA GCTGATTGTG ACCGATAACG GCAAGATGAT GGGGCTATTG
ATGATGAAGG AGTTTTACTC GGGCATGGAT AATGTCCGCG CTCAGCTGCG TAAACCGCTG
AAGCCTTGCG ATATGTAG
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| Protein sequence | MSSIIQSAGS EIIKPYQADI TVPNWMLSSM ERVMQFYVDR NLRLDTQSAD MMPAPVEGKK
YMLYAHVPFC HTLCSFCTFH RFLFKEDKAR AYFISLRKEM DMVKALGYDF ESMYIGGGTT
TVLEDELART IEHAKTLFPN IKEVSCESDP QHLDSPEFKQ LEGLVDRMSI GVQSFNDDIL
AMTDRLDKFG SGQQTFDKIM AAKELFPIIN VDLIFGFRGQ TDEIIQHDLD MASKLDPRQI
TTYPLMITHQ TRKSVKGKLA ASQGDMARQY RQILNSLNGQ YNQLSAWAFG KANNEGFDEY
VIDYDEYLGV GSGSFSFLDD TLYVNNFSLR KYHENINAGR MGVEQQKNYS KKDVMQYRFL
LGMFSGRLSR KYFRETFGVN LDTALFKEMT SMKVIGAIKN DPTDPDKLIV TDNGKMMGLL
MMKEFYSGMD NVRAQLRKPL KPCDM
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