Gene Swoo_4801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4801 
Symbol 
ID6119178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5787404 
End bp5787952 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content44% 
IMG OID641636382 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001763145 
Protein GI170729119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0368594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGT TATTTCAAAC AGAACGTATT ACCTGTCGCC AATTTGAGTC TGGTGATCTA 
CAGGCGTTTG CCGATTATCG TGCTCTCCCT GAGGTGGCCA AATACCAAAG TTGGAGCGAG
TACAGTTATC AGGATGCACT TACGCTATTT GATGAGATCA AGGGAGTTGA GTTTGGTTGT
TTAGGTCATT GGTTCCAACT GGCCATATTA ACTAAGGATT CTAAACAGAT GTTGGGAGAT
CTGGCCGTTC ATTTTATTGA TGGAGAGCAG ATTGAGATTG GTTTTACGTT TGCCCCAGAT
TTTCAGGGAC AAGGATACGC ATCTGAAGCG GTAATTGGCT TGCTAACTTA CCTCTTTTCA
ACCTTAAAAC CTCATAGGGT GATAGCGACT ACTGACTGCG AAAATCTTCC CTCTTGGTTG
TTATTGGAAA GAGTGGGCTT TCGACGAGAG GCACATTTTA TCGAAAACGT CTTCTTTAAA
GGTGCTTGGG GCAGTGAGTT TCAGTATGCG ATGTTAGCGT CGGAATGGCG TAGTGGTAAC
GGAGGTTAG
 
Protein sequence
MEPLFQTERI TCRQFESGDL QAFADYRALP EVAKYQSWSE YSYQDALTLF DEIKGVEFGC 
LGHWFQLAIL TKDSKQMLGD LAVHFIDGEQ IEIGFTFAPD FQGQGYASEA VIGLLTYLFS
TLKPHRVIAT TDCENLPSWL LLERVGFRRE AHFIENVFFK GAWGSEFQYA MLASEWRSGN
GG