Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4797 |
Symbol | |
ID | 6119174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5783601 |
End bp | 5784299 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636378 |
Product | MOSC domain-containing protein |
Protein accession | YP_001763141 |
Protein GI | 170729115 |
COG category | [S] Function unknown |
COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00107513 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGAAC AATTACTGGT TAAACGTTTA TCGGGTCTAT ATCTGGGCGA AGAGTTCAGT GAGTCGACAG GGATTATTAG TGGGATAGCC AATAAAAAGT CCTCCATCAA GTTAGAAGTC AATATTGATC GTGTTAGTGG TGATGCTCAA GCCGACCCTA AGCATCATGG TGGATTAGAC AGGGTGCTGC ATCATTTTCC TCGAGAGCAT TATGGTCAGT ACCGCCGCTG GGATATGATG AATGGCTTCA AGGATGGACC TGCCATGGGT GAAAACATTA GTACCGTGGG GCTAGATGAG GCTCAGGTAA ATATCGGTGA TATTATTGCT ATCGGTGAAG TTCAGCTACA GGTGACTCAA CCTAGATCGC CATGTTTTAA GTTAAACCAA CAGTTTGGCC ATAAGGAGTT TGCACTTGCG ATGCAGACTA GCGGCCTGTG CGGCTGGTTT TACCGAGTGC TCAAACCAGG TGTGATCCAA CAAGATGATA GTGTAACCCT GTTAGAGCGA CGTACACAGA TGAGTGTGCG TGATGCTATG GCTATCTACT TTGCACCTGA GTTTGATGCA TCAGCTTATG ATCGTCTGAT TAGTAGTGAA GGGCTCGCCA CCTCCTGGGT GAATAGCTTA CAGAGAAGGT TGGATAGCCA AAAGATTGAG AACTGGCAGA TGCGTCTGTT TGGTCCACAA GCGAGTTAA
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Protein sequence | MSEQLLVKRL SGLYLGEEFS ESTGIISGIA NKKSSIKLEV NIDRVSGDAQ ADPKHHGGLD RVLHHFPREH YGQYRRWDMM NGFKDGPAMG ENISTVGLDE AQVNIGDIIA IGEVQLQVTQ PRSPCFKLNQ QFGHKEFALA MQTSGLCGWF YRVLKPGVIQ QDDSVTLLER RTQMSVRDAM AIYFAPEFDA SAYDRLISSE GLATSWVNSL QRRLDSQKIE NWQMRLFGPQ AS
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