Gene Swoo_4797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4797 
Symbol 
ID6119174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5783601 
End bp5784299 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content46% 
IMG OID641636378 
ProductMOSC domain-containing protein 
Protein accessionYP_001763141 
Protein GI170729115 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00107513 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGAAC AATTACTGGT TAAACGTTTA TCGGGTCTAT ATCTGGGCGA AGAGTTCAGT 
GAGTCGACAG GGATTATTAG TGGGATAGCC AATAAAAAGT CCTCCATCAA GTTAGAAGTC
AATATTGATC GTGTTAGTGG TGATGCTCAA GCCGACCCTA AGCATCATGG TGGATTAGAC
AGGGTGCTGC ATCATTTTCC TCGAGAGCAT TATGGTCAGT ACCGCCGCTG GGATATGATG
AATGGCTTCA AGGATGGACC TGCCATGGGT GAAAACATTA GTACCGTGGG GCTAGATGAG
GCTCAGGTAA ATATCGGTGA TATTATTGCT ATCGGTGAAG TTCAGCTACA GGTGACTCAA
CCTAGATCGC CATGTTTTAA GTTAAACCAA CAGTTTGGCC ATAAGGAGTT TGCACTTGCG
ATGCAGACTA GCGGCCTGTG CGGCTGGTTT TACCGAGTGC TCAAACCAGG TGTGATCCAA
CAAGATGATA GTGTAACCCT GTTAGAGCGA CGTACACAGA TGAGTGTGCG TGATGCTATG
GCTATCTACT TTGCACCTGA GTTTGATGCA TCAGCTTATG ATCGTCTGAT TAGTAGTGAA
GGGCTCGCCA CCTCCTGGGT GAATAGCTTA CAGAGAAGGT TGGATAGCCA AAAGATTGAG
AACTGGCAGA TGCGTCTGTT TGGTCCACAA GCGAGTTAA
 
Protein sequence
MSEQLLVKRL SGLYLGEEFS ESTGIISGIA NKKSSIKLEV NIDRVSGDAQ ADPKHHGGLD 
RVLHHFPREH YGQYRRWDMM NGFKDGPAMG ENISTVGLDE AQVNIGDIIA IGEVQLQVTQ
PRSPCFKLNQ QFGHKEFALA MQTSGLCGWF YRVLKPGVIQ QDDSVTLLER RTQMSVRDAM
AIYFAPEFDA SAYDRLISSE GLATSWVNSL QRRLDSQKIE NWQMRLFGPQ AS